Thamnophis sirtalis (common garter snake): 106543214
Help
Entry
106543214 CDS
T06107
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106543214 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106543214 (MBD4)
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106543214 (MBD4)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
106543214 (MBD4)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106543214 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
DX
Motif
Other DBs
NCBI-GeneID:
106543214
NCBI-ProteinID:
XP_013914627
UniProt:
A0A6I9XL02
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MAVQRNTRLRTKRSSTRNAGIDIESCISSPVSLPGLGNGDGDCKSSLESNLELRSDNREP
EIPGTCLQDVPNTGDTSKDCFFKNDRNSTIRRKIQIRKSKKSSEISNVTGGQNKRQSLSA
CKKQVQSNKRAICKNKICVLNSDSSENKVCRRSSRKRKICFKDELLSQPKTEQNDKQIEP
FQTSMEIVHVKCTESSCSKIPTAANKNLSVVEMQRNVLTSESASEQRASTMDVTVSQMCR
EKPCTSIKERRTQRTQVERRKTSPYFSRKLIKEAPSPPRRKAFRKWTPPRSPFNLVQETL
FHDPWKLLIATIFLNKTSGKMAIPVLWEFFKKYPSPNVARTTNWKEMSELLKPLGLYELR
AKTIVKFSDEYLVKQWKYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNIYHSWLSE
NHEKLNLNY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcagaggaatacacggttaagaaccaaaagatcttctaccagaaatgcaggc
atagacattgagagttgcatttctagtccagtttcactccctggattaggaaacggtgac
ggagattgtaaatcttctctagaaagtaacttggaacttcgatctgataatagagaacca
gaaattcctggtacctgtttgcaggatgtgcctaataccggagatacttctaaggactgt
tttttcaaaaatgatagaaatagtactattcgaaggaagattcaaattagaaaatctaaa
aaatcttctgaaataagtaatgtcactggtggccaaaacaaaagacagagtctatcagca
tgtaaaaaacaggtgcaaagcaataaacgtgccatatgtaagaacaaaatatgtgtactt
aatagtgattccagtgaaaacaaagtatgccgaagaagttcaaggaaaagaaaaatatgt
tttaaggatgaactgttgtctcaaccaaaaacagagcagaatgataaacagattgaacct
ttccaaacaagcatggaaatagtacatgtaaaatgtactgagagttcttgcagcaaaatc
cctacagctgctaataaaaacctttcagtagtagaaatgcaaagaaacgtgttgacttca
gagagtgcaagtgaacagagggcttccactatggatgttactgtttcccagatgtgccga
gagaaaccttgtacatcaatcaaagagagacgtactcaaagaacccaagtggaaaggcgg
aaaaccagtccatatttttctagaaaattaatcaaagaagctccaagtccaccaagaagg
aaagcttttaggaaatggactccacctcgttctccttttaatctggttcaggaaacattg
tttcacgatccatggaaacttctgattgcaactatatttctgaacaaaacctcaggaaag
atggctatccctgtgctgtgggaattttttaagaaatatccttcaccaaatgtagcaaga
actaccaactggaaagaaatgtcagaattgcttaaacctcttggcctatatgaactcaga
gcaaagaccatcgtcaaattttcagatgaatatttggttaagcagtggaaatatccaatt
gaattacatgggattggaaaatatggaaatgattcttacagaattttctgtgtgaatgaa
tggaaagaggtacagccacaagaccacaaattgaacatttatcattcctggctgtcggaa
aaccatgagaaattaaatcttaattattag
DBGET
integrated database retrieval system
