Thamnophis sirtalis (common garter snake): 106543235
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Entry
106543235 CDS
T06107
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106543235 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
106543235 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
LRR_EndoS
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
106543235
NCBI-ProteinID:
XP_013914669
UniProt:
A0A6I9XG77
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MEALRTGEEGEEPPKSIRILGSELVETYTVYIIQVTVGTHEWIVKHRYSDFHDLHEKLVL
EKKIDKNILPPKKIIGKNSKSLVEKRQKELEVYLQTLLAIFPLAAPKVLSQFLHFHLYEV
IGITAALAEELFHKGEQLLVAGEVFNIKPLQLYAVTQQLRQGKPTCANGDARTDLGHILD
FTCRLKYLKITGTDGPVGSSNIQEHLLPFDLSIFKSLHQIQINHCGAKLINGLTSSKHTL
ATLSVQFSATSMMEILVPEAYEFDQWEPEGTSSNPVTAVIPTWRTLTTLDMSHNRIAQID
NSVKLMPKIEFLDLSHNDVPLVENLQHLYNLIHLDLSYNKLSTLEGIHTKIGNIKTLNLA
GNHLERLSGLNKLYSLVNLDLSNNKVDQIDEIRNIGGLPCLEKLVLANNPLSIIPDYRTK
VLAQFGDRASEVCLDNTVTTEKELDTVEVLKAIQKAKDVKYKMTNSDKKIPEDSKLSATS
SKSNCSSLSVHPSSPSLPRPVSSSQEITHKKTALTRSFSSSSLTPKSHTVTQRCPETPDS
CSASQVSAPDLDFSDKSTHRMCSGYPEEGPDSLPDSLNTVTLPFTCMSYATTNQDFVQHL
STLIAEAVGNVPLFSVETENMGDLLSDSGVAETEDGYFEMGLHEGYQISKVTPTSSGVQM
TQAKQDNVIKILWSFCIQVHKGLRQFASCFVLASNVIAVFEIVQDSKGNCQHILSALKVV
LCFPYSDLSEFGFLIPEICLMLNINNGETCLCVVSDTQNLQDFYSCLHQFRSQRYKPALT
GSVLYCGKASLQEFVYQLMGFYHISSENTEIKGCFPVYLFCHHKADGQKEQCLPELGNDG
KTCCKHCGCSGFYSAIHKSAGESHCMLHPCWIFLTPHHLHIVKVDFNILPGKFMDSENAR
NIFKLNRIPLASVLLHPTCYSVQQEGSFSDGYVLELIIGFRFVTAIFVLPHEKFHFLRIY
SFLRTLLQDIKTIIIFKDANHVESVRKSLTDCLRHGPTTSFCKPRLPFSSLYPSEFLMQR
ITDENQIPMHLSVSPSLQYVAGLKEKYIMEFFHNSIAEVENEELRHLMWSSVLFYKALDM
EVTACVLLSTKAIYFLLDDSVTHSNDHHLGFWGTDVLGYEFISFHLTPCLVLKLNDLHSV
NIGLFDQYFRLTGHSAEHILTCLTRDSYSTHAFIQHLMAVLSLLARTPSPEPVDKDFYSE
FGKKNTGKMENYELIHSSRVRFIYPNEEEIGDLAFLVAEKMKSVMKSPSLNLLLYVLAFQ
VNITEGIAQAYSSLQPKTLILTSSDLFLFNEDYISYPRPEFAKEPPKRDKYQLADGRRIR
DLDRVLMGYQAYPQALTFVFDDIQNHDLMQNLTLDHFGNVFSFPKGQAAQEGNVSQEVLW
CVFIPSPDSREKLISLLARQWEILCGRELPLELTG
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctgaggaccggcgaagagggcgaggagcctcccaaaagcatccgcattctt
gggtcggagctggtggagacctacacggtttatatcattcaagtgactgttggaacccat
gaatggatagtaaaacatcgatatagtgacttccatgatcttcatgaaaagcttgtttta
gagaagaagatagacaagaatatattgcctcccaaaaagattattggtaaaaattccaaa
agcttggtggaaaaaagacaaaaagagttggaagtatacttacaaacccttcttgctata
tttccattggcagcacccaaagtactatcacaattcttacattttcatttatacgaagtc
attggaatcacagctgcattggctgaagaactttttcataaaggagagcaattacttgtg
gctggtgaagtctttaatattaaacctttgcagctttatgctgttactcaacagctgcgt
caggggaaaccaacttgtgcaaatggtgatgccagaactgatcttggtcacattctggat
ttcacatgcagactcaaatatttaaagataactggcacagatggtcctgttggaagcagt
aatattcaggaacatcttttgccttttgatctatcaatatttaaatctcttcatcagatt
cagataaatcactgtggtgcaaaacttattaatgggctgacatcttcaaagcacacacta
gcaacactaagtgtacaattctcagcaacatccatgatggagatcctagtacctgaggcc
tatgaatttgaccagtgggagccagaaggcacatcttcaaatcctgtgacagcagttatt
ccaacttggagaacattaacaactttagatatgagtcataataggatagctcaaattgac
aattcagtgaaattaatgccgaagattgaatttctggatttaagccacaatgatgtacca
ctagtggagaatttacagcatctctacaatcttattcacctggacctctcctacaataaa
ctttcaacgttagaaggaattcatacaaaaattggaaatattaaaacgttgaatttagca
gggaatcatctggaaagactttctggactcaacaaactctattctttagttaacctggat
cttagtaacaataaagtggaccagattgatgaaataaggaatataggaggccttccatgc
ttggaaaagcttgtgttagccaacaatcccttgagtattattcctgattataggaccaaa
gttctagctcagtttggagacagagcctcagaggtttgtttggataataccgtaaccact
gaaaaagaacttgacactgttgaagtgttgaaggctatacaaaaagcaaaagatgtaaaa
tacaaaatgactaattctgataagaagatccctgaagattccaagctttctgccaccagc
tcaaaatcaaactgctcttctctttctgttcatccttcctctccttctctgccacgtcct
gtcagctccagtcaagaaataacacacaagaaaacagccctaacccgtagtttctcatca
agtagtttgactcctaaaagccatacagttacccaaagatgccctgaaacaccagactca
tgtagtgcaagtcaggtatctgctccagatttggacttttctgataaaagcacacatcgc
atgtgctcgggatatccagaagaaggacccgattccttgcctgactcccttaatactgtt
actctgcctttcacttgtatgtcatacgctaccacaaatcaggactttgtgcaacatctc
tctaccttgattgcagaggccgtgggaaatgtgcccctcttttcagtggaaactgagaac
atgggagatcttttgagtgactccggagttgcagaaactgaagatggctactttgaaatg
ggacttcatgaaggatatcagatctctaaagtgactcccacctcaagtggtgtgcagatg
acccaagcaaaacaggataatgtaatcaaaatcctctggagtttttgcattcaggttcat
aaaggactcaggcagtttgcttcctgttttgttttggccagtaatgtgatagctgtattt
gaaattgttcaagattccaaaggaaattgccagcatatactttctgccttgaaagttgta
ctttgctttccatactctgacctcagtgaatttggttttttaataccagaaatatgtttg
atgctcaacataaacaatggagaaacctgcttgtgtgttgtgtcagacactcagaatctg
caagatttctattcctgtttacaccagtttcgctctcagcgctataagcctgctttaaca
ggttctgtactgtattgtggcaaagctagtttgcaagagtttgtctaccagctgatgggg
ttttatcatatttcatctgaaaacacagagataaagggttgtttcccggtttatctcttc
tgtcatcataaagctgatggtcaaaaggaacaatgtctgccagaactgggcaatgatggt
aaaacctgttgtaagcattgtggttgctctggattttactctgcaattcataaatcagct
ggagagagccattgtatgctgcatccttgttggatatttcttacacctcaccatctacac
atagttaaagttgatttcaatatactgccaggtaaattcatggactcagagaatgccagg
aacattttcaaactcaacagaattccactggcttctgttcttttgcatcccacgtgttac
tcagttcagcaagaaggttcgttttcagacggatacgtcctggaattgataattggcttc
agatttgtcacagcaatatttgtcctacctcacgagaaattccattttctgagaatctat
agttttctgaggacccttttgcaagacatcaagactataattattttcaaagacgccaat
catgtagaatcagtcagaaagtctttgacggactgtttaaggcatggtccaactacaagc
ttttgcaagcctcgtttgccattctcatctttgtacccatctgaatttctgatgcaaaga
attactgatgagaatcaaattcctatgcacctttcagtctctccatctcttcaatatgta
gctggactaaaagaaaaatacattatggaatttttccataacagcattgctgaggtcgaa
aatgaagaactaagacatctcatgtggtcatctgttctgttttataaagccctggatatg
gaagtgacagcttgtgtactactttcaactaaagctatttacttcttgttggatgattct
gtgacacattctaatgatcaccatttaggcttttggggcactgatgtcttgggctatgaa
ttcatctctttccatcttactccttgcttagttctaaaattaaatgatctgcattcagtg
aacattggactttttgatcagtattttcgacttactgggcattcggcagaacatatatta
acctgcctaaccagagacagttacagcactcacgcttttatccagcacctcatggcagtg
ctctcactccttgcaaggacaccatcaccagaaccagtggataaggacttctactctgaa
ttcgggaagaaaaatacaggaaaaatggaaaactatgaactgattcactctagcagagtg
agattcatatatcccaatgaagaagaaattggggaccttgcgtttttggttgctgagaag
atgaaaagcgtcatgaaatccccgtccctgaatctactcctttatgtattggcatttcag
gtcaatattacagaggggattgctcaggcctacagttccctccagcctaaaacactgatc
ctaactagctcagatttgtttcttttcaacgaggactacatcagctacccacggcctgag
tttgcaaaagagccaccaaagagggataagtatcagcttgcagatggaagaagaatccgc
gacctagatcgggtgctcatgggctaccaggcctatccccaggcactcacgtttgttttt
gacgacattcagaatcacgatctcatgcagaacctgaccttggatcacttcggcaatgtc
ttcagtttccctaaaggacaggctgcacaagagggtaatgtcagccaagaggtgctctgg
tgtgtctttatcccaagtcctgatagccgcgaaaaactgatctcactacttgctaggcag
tgggagatattgtgtggtagggagttgcctttggagctcaccggataa
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