Thamnophis sirtalis (common garter snake): 106543237
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Entry
106543237 CDS
T06107
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106543237 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106543237 (NUP50)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106543237 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
106543237
NCBI-ProteinID:
XP_013914673
UniProt:
A0A6I9XVJ7
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All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MIQRLHLCDPWKEGSVVSSVSANNITVEKTSAHAEANGENPEPLSPGLTQSKACNSKIYH
KQLAALNCSVRDWIVKHVNTNPLCDLTPIFHDYERYLADIEQKGLAGSGSSGSSSKATEA
QPRPAFGSTALPQSSTFLFSSKSEETLGKKTELEKKTELKPAAASTTTLFSFGKSGKSGL
SSGAAGSGFSFSPGNGGLFGKDASQTKVASSFSNNALDAPAEKAGNTQTGGDEEEEEPPK
VVINEVKEEDAFYSKKCKVFYKKDNEFKEKGVGTLHLKPASN
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaagactgcacctgtgtgacccatggaaggaaggttctgtggtctccagtgtc
tcagccaataacattacagttgagaagacctctgcgcatgcggaagccaatggtgagaat
ccagagcccttgtctcccggactcactcagagcaaagcctgcaactcgaagatctatcat
aaacagttggccgccctcaattgttctgtacgggactggatagttaagcatgtcaacacc
aacccgctctgtgacctgacccccatcttccatgactatgagagatacttggctgacata
gagcaaaagggccttgctggcagcggcagctctggaagcagcagcaaagccacggaagct
cagccccgtcctgcgtttgggagcaccgccctcccgcagagctccacgtttttgttcagc
agcaaatcggaggagaccctcgggaagaaaacggaattggaaaagaaaacggaactcaaa
ccggcagctgcctccactaccaccttattctcttttggcaaaagtggcaaatctggtctg
agttcaggggcggcagggtctggattctcattttcccctggaaatggaggtttgtttggc
aaagatgcaagccagaccaaggtggcttcttccttttccaataatgcattagacgccccg
gccgaaaaagctggcaacacacaaacagggggtgatgaagaggaggaagagccgcccaaa
gtagtaattaacgaagtcaaagaagaggacgccttttactcaaagaagtgcaaagtcttc
tacaagaaagacaatgaatttaaagaaaaaggagtaggaacgttacatttaaaacctgcc
agcaat
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