Thamnophis sirtalis (common garter snake): 106543248
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Entry
106543248 CDS
T06107
Symbol
RPS27A
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03010
Ribosome
tsr04120
Ubiquitin mediated proteolysis
tsr04137
Mitophagy - animal
tsr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
106543248 (RPS27A)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106543248 (RPS27A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106543248 (RPS27A)
04137 Mitophagy - animal
106543248 (RPS27A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tsr03011
]
106543248 (RPS27A)
04121 Ubiquitin system [BR:
tsr04121
]
106543248 (RPS27A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106543248 (RPS27A)
Ribosome [BR:
tsr03011
]
Ribosomal proteins
Eukaryotes
Small subunit
106543248 (RPS27A)
Archaea
106543248 (RPS27A)
Ubiquitin system [BR:
tsr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
106543248 (RPS27A)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106543248 (RPS27A)
Exosomal proteins of colorectal cancer cells
106543248 (RPS27A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
106543248
NCBI-ProteinID:
XP_013914691
UniProt:
A0A6I9XL35
LinkDB
All DBs
Position
Unknown
AA seq
165 aa
AA seq
DB search
MVMKVVSASDVVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
TLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVNQFHCCNLNSGEKVGSY
KLQILRKKYFFKPAFFNIKLKVIYNHVYVYIHIHTYIRTYVRTYV
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgaaggtggtctctgcaagcgatgtggttgaaccatctgatactatagaaaat
gtcaaagccaagatccaggataaagaaggaattcctcctgaccaacagcgtttaattttt
gctggcaaacaattggaggatggacgtactctgtctgattataacatccaaaaggagtca
acacttcatcttgtgctgagacttcgtggtggggcaaagaaaagaaagaagaagtcttac
accactcctaagaagaataaacataagagaaagaaggtgaaacttgccgtccttaaatac
tacaaggtaaatcagtttcactgttgcaacttgaattcaggagaaaaagttggcagttat
aagctgcagattctcagaaaaaaatatttttttaagcctgccttttttaacataaagctc
aaggtgatatataatcatgtatatgtatatatacacatacatacatacatacgtacgtac
gtacgtacgtacgtataa
DBGET
integrated database retrieval system
