Thamnophis sirtalis (common garter snake): 106543371
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Entry
106543371 CDS
T06107
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106543371 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106543371 (DMXL1)
Membrane trafficking [BR:
tsr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106543371 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
106543371 (DMXL1)
RAVE complex
106543371 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_HPS5
MIOS_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
106543371
NCBI-ProteinID:
XP_013914856
UniProt:
A0A6I9XLL4
LinkDB
All DBs
Position
Unknown
AA seq
3047 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGNVDGHPFTAYASGCDIVILGTDFERLQIIPGAKYGNIQV
GCVDCSMQQGKIAAAYGNIICIFEPVKHLKQKNNNYGLFYQWQNSDQICLEHVVHNLTWD
PTGSRLLTSSSCLQLWSNVNFENLSEDENREKADTQNWRIIWQTKTASQVHLMMFSPDGE
FFATAGKDDCLVKVWYNTDCWKSVIASQHTTPESKMEELSFSFIYLIHPRSVDGFSWRKT
SNYMPRGAVCNVLLTCCKDNICRLWAETLLPNDSLLYEDGYNNWPEPVKLNNFKRNASSK
ESMKNALELNLKPFRRGRRRSIALAHTGYLPHQQDPHVVHRNNPLQSNALCHFHIAASIN
PATDIPLLPSIMSLSLNESEEKSGPFVVHWLNNKELHFTLSMEVFLQQFKRNFEHISSEA
STEEPNQMTFRSDEETDDSKEEQRRNQEQKEFPGEKPVLNSSSIPLSSAVIDHEIEIQLT
EWNKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLCR
SIVMYACTKNVDLALQQGKQKPSLGRSCSMLISSGHSKLPNNVKLSIFTPNVMMISKHAD
GSLNQWLVSFAEESAFSNVLSICHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNAVRIPV
LDSTEEASPEHQNKSSACKSQDLTAVYSELILWRVDPVGPLSFSGGVSELARINSLHVSA
FSNVAWLPCLIPSYCLGAYCNSPSACFVASDGQHLRLYQAIIDAKKLLCELSNPGISKYV
GKFFNIISQQSTARPGCIVELNSITELHGEKMQLLHVFQEDFIMNNLENRFSEKESILLD
PGYQENGFSEKFYLIVIEYTQNCSLLHMWKLHLKSLPVSVDEKIAPKASETTSQEELHSS
SPDQEKLHISFTKKYQVCRDNLQSTSQLVLSSEIVYSQELNLPEGVEIVSIKPSAGHLSS
SSIYPVRQAPYLLATLCSDGKVRFWRCRMAQETDVLSKPENTKNSGMYVWEEWPLLIEDG
HLSSSALEVSGLSLEISCAHTNRLAVAYKRTPPQNSNSQDFFVNVGIFECESTGGSCWNL
EQTLHLDELNLTLDSLSVNSSSMAVGNKNLTFRTKHLVHLDWMSREDGSHILTVGIGSKL
YMFGQLAGKIQEQSAKEMLVLPVWDNAKTSCTSRFILLRCVDLVSSVEGSPPLPVSLSWV
RDGILVVGMDCEMHVYSQWQPFSKQDPITADSFSVSTPSITSLVKQSQSSGVPPSKRTLT
RSMASFAQKLGGKRSVFDLSLEMEDSGLFEAAHSLCPTLPQYHPVQLLELMDLGKVRRAK
AILSHLVKCIAGEVIALSDPCHEKRYRSLSICASGSSTRDPMTFNRCVITDYTEIDSVPP
LPLYALLAADEECSYACTEKSNTPKNLNKHVTDENYEDLFQNSSLYTDELTTIEVDEDDK
KPKVIDLSQYNPTYFGQEHAQVLSRHLLHSSLPGLTRMEQMLLMALADTIAITSTDIGES
RDRNKGGETLDECGLKFLLAVRLHTFMTTSVPPAHRPQLLYQGLSSSHFAWAFHSIAEEE
LLNMLPAVQKGDPTWSELRAMGIGWWVRNTHNLRRCIEKVAKAAFQRNNDPLDAAIFYLA
MKKKTVIWGLYRSLKDTKMTQFFGNNFTEDRWRKAALKNAFSLLGKQRFEHSTAFFLLAG
HLKDAIEVCLEKLNDIQLALVIARLYESEFETSGTYKSILQKRILGSKPHSTESPSTPHF
DPFLRSMAYWILEEYGHALDTLLSHPTLNDEDEGSFSNCSPSVFNFYNYLRTHPLLLRRH
FGSSDLSSTRICVTGEKGLADEINLEERKLFFTAAYTHLKSGCPMLALEVLSKMPKVVKK
SKSLRRTFSLRNTSKECSPSSPMPVESKDDQLFRTDRSEPVLNGLGPLSDASPDKHSVSD
ALLDWSQPAAVFQDDPLELKWDSDKDEESEDSCLVMKPLQKITGEKTNEVNSSCTETYSS
GGENDVLASSEDIIFVQLKFRACLKILTEELRTLSTGYEVDGGKLRYQLYNWLEREVVAL
QKTCEYNIEADDSQREIIPVMGENCLNEKTEDLSDIQLKENIQRRHWLIKYQSLLRMFLS
YCILHGSHGGGLASVRMELILLLQESQQEFSEQLYSNIVSEPSTIPLLFACTASAKTVVA
NPLLHLSNLTHDILHAIISLDSPPHPDVQNNKIHVMHTLAASLSACIYQSLCGGHNYSLL
QANQFTGMIYQTLLLSHRHSLRTASSDETVTPNTTPAQWPGIMDLIQLLNQAGEEAQSGI
TVLLCEILTAIYLSLFIHGLATHSSNELFRIVAHPLNDKMWFAVFGGGAKIPKKGPIQET
TKMGRHFSMPSPHQVVVFSMECVGFTKSLTTISTHSPTKLAASSPIDDGEKQNKQFRLTS
KSSSKENSPTNLPGKEQDTSIYKEKFIPPELSIWDYFIAKPYLAASQTRFEYDSEESQDS
SDEDEDGAFLSDSKLQEHSNSNSFSWSLMRLAMVQLVLRNLKSFYPLAGHDLTELPVCSP
LCHAVLKALQRWEQVLLRRLEMHGGPPENFISIHILQDASSSGPALLRHKALLEPTNTPF
KSKSHYALSVKRLWQYLVKQEIVQETFISNIFAKRKCLNESLEDQSEFTKTSSGEESGVN
KIEHDAGSPGSKARIIHKESDIITAFAVNKANRNCIAIASSHEIQELDVSGILATQIYTW
VDDDIEVEAKGADDFLVIHTRDDLGNIQGTTPYTHSTPGTPINMPWLGSTQTGRGAAMMI
KKNLNNVRRMASHPTLPYYLTGAQDGSVRMFEWGHSQQLACFRSGGNSRITRMRFNYQGN
KFGIVDGDGHISLYQTNCKGCLHNGSTSKPYLTWQCHNKTASDFVFISSSSLIATAGLST
DNRNICLWDTLVAPSSSLVHAFTCHDTGATVLAYAPKHQLLISGGRRGYTCLIDLRQKQQ
RQFFQSHDSPVKAIAVDPTEEYFVTGSAEGNIKVWSLSNFSLLHTFLNEHSRQSIFRNLG
TGVMQIETGPANHIFSCGADGTVKMRILPDRFNSFGEVLKTGVKYVF
NT seq
9144 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctaacgggggctgtcaaccccggggacaactgcttctccgtg
gggaacgtcgacggccaccctttcacggcttatgcatcaggatgcgacatagtgatattg
gggacagattttgaaagattacaaataattcctggagcaaaatatggaaatatacaagtg
ggatgtgtagattgttccatgcagcaagggaagattgcagctgcttatggaaatataatt
tgcatctttgagccagtcaaacatctaaagcagaagaataataattatggattattttat
caatggcagaattcagatcagatttgcttggaacatgttgtgcataatttaacctgggat
cccacaggttctcgtctattgactagttccagttgtttgcagctttggtctaatgtcaat
tttgaaaatctgtcagaagatgaaaatcgtgaaaaagctgatactcagaactggagaatc
atctggcagaccaaaactgcttctcaagttcatctaatgatgttttcaccagatggagaa
ttttttgctactgcaggaaaggatgactgtcttgtaaaggtgtggtataacactgattgc
tggaaatcagtaattgcatcacaacatacaacaccagaaagcaaaatggaggaactcagt
ttttcatttatttatctgattcatcctcgatctgtcgacggtttttcatggcgaaaaaca
agcaactatatgccgcgtggtgctgtgtgtaatgtactgctgacctgctgcaaagacaat
atatgccgtctctgggcagaaactctgttgcctaatgatagcctcttatacgaagatgga
tataacaattggcctgagccagtgaaattaaataactttaagaggaatgcttctagcaaa
gaaagcatgaaaaatgctttagagttaaatctaaaacctttccgacgaggaagaagaaga
tcaatagcacttgcacatactggatacttgccccatcagcaagaccctcatgtagttcat
cgaaacaacccattgcagtcaaatgcactttgccatttccacattgctgccagcatcaat
ccagccacagacattcccttgctcccttctatcatgtctctgagtcttaatgaaagtgaa
gaaaaaagtggtccttttgtagtgcactggctaaataataaagaattacattttacgcta
tcaatggaggtttttttacaacagtttaaaagaaattttgagcatatttcctcagaagcc
agcactgaagaacctaatcagatgactttcagatctgatgaagaaactgatgacagtaaa
gaagaacagagaagaaatcaagaacagaaagaatttcctggtgaaaaacctgttttaaat
tcaagctccattcccttgtcttcagctgttattgatcatgaaattgaaatacaactaact
gaatggaataaaaatgcagatatgctatttagtattcatccaatggatggatcattgctc
gtatggcatgtcgattggctagatgaataccaaccaggcatgtttcgtcaagtacaggtg
tcatttgtttcaaggattcctgttgcctttcctactggtgatgcaaattcactttgcaga
agtatagtgatgtatgcttgtacaaaaaatgttgaccttgctcttcagcaaggcaaacaa
aaacctagccttggtcgctcctgctctatgttaatttcttcaggtcatagcaaattgccc
aacaatgtaaaactaagcatcttcaccccaaatgttatgatgatttccaagcatgcagat
ggatcgctaaaccaatggctagtcagctttgcagaggaatctgctttttcaaatgttctc
agtatttgccacaaatcacgatactgtggacatcgtttccaccttaatgacttggcttgc
cattcagtacttccattgctactcacaacctctcatcacaatgcagtgaggataccagtt
cttgatagcacagaagaggcatctccagaacatcaaaataaaagttctgcctgcaaatct
caggatcttactgctgtttacagtgaacttatcctctggagagttgatccagttggccca
ctgtctttttctggtggagtttctgagcttgcaagaataaattctcttcatgtatctgct
ttttcaaatgtggcatggttgccttgcctcatacctagttactgcttaggtgcgtactgt
aattcaccaagtgcttgctttgttgcgagtgatggacaacatttaagactctatcaagct
ataatagatgccaaaaagctactctgtgaactatcaaatccaggaatttctaaatacgtt
ggcaaattttttaacatcataagtcagcaatctacagctagaccgggttgcattgtagaa
ctgaattctattacagagctgcatggtgagaaaatgcagctacttcatgtttttcaagaa
gatttcattatgaataatcttgagaatagattctctgaaaaagaatcaatactacttgat
cctggatatcaggaaaatggattttctgaaaaattctatttaattgtaattgaatatact
caaaactgctcactgttacatatgtggaaattacatttgaaatccctaccagtctcagtg
gatgaaaaaatagcacctaaggcatctgaaacaacatctcaagaagaactgcattcttct
tctccggaccaagaaaagcttcacatttcctttacaaagaaatatcaagtttgcagagat
aatcttcagagcaccagccaattagttctttcttcagaaattgtctatagtcaagaactg
aatttaccagaaggagtggagatagtaagcattaaaccatcagcaggtcacttaagtagt
tcttcaatttatccagttcgccaagctccttatcttcttgcaacactttgctcagatggg
aaagttaggttttggaggtgtagaatggcacaagaaacagatgtgttatccaaaccagag
aatactaagaacagtggtatgtatgtatgggaagaatggccattgctaattgaagatgga
catcttagtagcagtgcccttgaagtgtctggtttatctcttgaaattagctgcgctcat
acaaatcgtttagctgtggcatacaagcgaacaccaccccaaaacagtaattctcaagat
ttttttgtgaatgtcggcatttttgaatgtgaatctacaggaggctcttgttggaacttg
gaacaaacacttcatttagatgaactaaatctaacattggattcgctgagtgtcaatagt
agttcaatggcagtaggaaataagaacttaacattcagaacaaagcatttggttcattta
gactggatgtctagggaagatggctctcatatattaacagtaggcattggttcaaagctt
tatatgtttggtcagttggctgggaaaatacaggaacaaagtgctaaggaaatgcttgta
ctgccagtatgggataatgctaaaacctcttgtacatctagatttatactgttacgatgt
gtcgatttggtctcatcagtagaagggtcgcctcctttaccagtttctttgtcttgggtt
cgtgatggcatccttgtggttgggatggattgtgaaatgcatgtgtattctcaatggcag
ccattttcaaagcaagatcccattactgcagactctttcagtgttagtacaccatctata
acaagtttggttaaacaaagccagtcgtctggtgttcccccatcaaagcgaacattaacc
cgatccatggctagctttgctcaaaaacttggtgggaaacgatctgtatttgatctgtca
ctggagatggaagattctggtctttttgaagcagctcattcattatgtcctactttacct
cagtatcatcctgtgcaacttttggaacttatggatctagggaaagtacgtagagcaaag
gccattttatctcatctagtcaaatgcattgctggagaagttattgctttaagtgacccc
tgccatgagaaaaggtatcggtctctctcaatctgtgctagtgggagtagtacaagagac
cctatgacatttaacagatgtgtaattacagactatacagaaatagattctgttccaccg
cttcctttgtatgcattgcttgctgctgatgaagaatgttcctatgcttgtactgaaaag
tcaaatactccaaagaaccttaacaaacatgtgactgatgaaaattatgaggatctattt
caaaattccagcctgtatacagatgaactgactacaattgaagtagatgaagatgacaaa
aagccaaaagttattgatctttctcagtataatccaacttactttggacaagagcatgcc
caagttctttctcgtcacttgcttcattctagcttaccaggacttaccaggatggaacag
atgctattgatggcattagctgatacaattgccattaccagtactgatataggagaaagc
agagacagaaacaaaggaggagaaacacttgatgaatgtggtttgaagtttcttttggca
gttcgtcttcacacttttatgacaacttctgtaccacctgctcacagacctcagctatta
tatcaaggtttgtcttcgagtcattttgcctgggcgtttcactctattgcagaagaagaa
cttctaaacatgcttcctgcagtacagaaaggtgatccaacatggtcagaacttagagct
atgggaataggatggtgggttcgaaatacccataatttgcgcagatgcattgagaaggtc
gctaaagcagcctttcaaagaaacaatgaccctctggatgcagccattttctatcttgca
atgaaaaagaagactgtaatttgggggctatacaggtccctaaaagatactaaaatgaca
cagttctttggaaacaattttactgaggacagatggcgtaaagcagcactgaagaatgct
ttttcattgctaggcaagcaacgttttgaacattctacagcattttttttattggctggt
cacttaaaagatgccattgaggtctgcctagagaaattaaatgacattcagctagctctt
gtaattgcaagactgtatgaatcagaatttgaaacatctggtacttacaaatcaattctt
cagaagagaattctgggaagtaagcctcattctactgaaagtccatcaacaccacatttt
gatccttttctccgaagtatggcttactggattttggaagagtatggtcatgctcttgat
actcttttaagccatcccactttgaatgatgaagatgaaggaagcttctcaaactgtagc
ccttcggtatttaatttttataattatctaaggacgcatcctctcttgctgagacgccat
tttggatcttctgatttatcttccacaaggatatgtgtaacaggagaaaaggggctggca
gatgaaatcaatttagaggaaagaaaattattctttactgcagcatatactcatttgaaa
tctggctgtcccatgttggctttagaagtattatcgaagatgcctaaagtggtcaaaaag
tcaaagagtttaagaagaacatttagtttaaggaatactagtaaagaatgttcaccctct
tctccaatgccagtagaatccaaagatgaccagcttttcaggactgacaggtcagaacca
gtgctaaatggtttagggccattatcagatgcttcaccagacaaacattcagtttctgat
gctttgcttgattggagtcagccagctgcagtcttccaagatgacccgttggaattaaaa
tgggacagtgacaaagatgaggaaagtgaggattcttgccttgtaatgaaacctttgcag
aagataacaggtgaaaaaacaaatgaagttaactctagctgcactgaaacctacagttca
ggaggtgagaatgatgtcttagcttcatcagaagacataatttttgttcagctgaaattt
agggcatgcctgaagattcttacagaggaacttcgaacattatccactggctatgaagta
gatggtggaaaattaagataccagctgtataattggcttgaaagggaggtggtagccctt
cagaagacatgtgaatacaatattgaagcagatgattctcagagggaaattatcccagta
atgggtgaaaattgtttaaatgagaaaactgaagacctatcagatatacaactaaaggaa
aatattcaaagaagacattggcttataaaataccaatcacttttgcgaatgtttcttagt
tactgcatcctccatgggtctcatggtggaggcttggcatctgtacgaatggaactgatt
ttgcttctgcaagaatctcaacaggaattttcggagcaattgtatagcaatattgtatct
gagccgagcacaatacctcttctttttgcctgtactgcaagtgccaaaacagtggtagcc
aacccattattgcatttgagtaacttgacacacgatatactacatgctattatttctctt
gactctccaccccacccagatgtacagaataataagatacatgtaatgcacacattagca
gcatctttatcagcttgcatataccagtctctctgcgggggtcataactacagtttattg
caagcaaaccaattcactggaatgatttatcagacgttgttgctttcccatcggcattct
ctaagaacagcaagttcagatgaaacagtaacaccaaatactacaccagctcaatggcca
ggaataatggatttaatacaattgctgaatcaagctggggaagaagctcagtctgggatc
acagttttgctctgtgaaattcttacggcaatctaccttagtctcttcattcatggtcta
gcaactcattccagcaatgaattattcaggattgtggcccatccccttaatgacaaaatg
tggtttgctgtctttggtggtggtgcaaagattcccaagaaaggaccaattcaagaaaca
accaagatgggtaggcacttctctatgcctagcccacatcaggtagtagtattttctatg
gaatgcgtggggtttaccaaatctctaacaaccatcagtactcatagtcctaccaaactt
gcagcctcttctcctatagatgatggtgagaagcaaaataagcagtttagactgacatca
aaatcatcatcaaaagaaaattcacctactaatttacctggaaaagaacaagatacttca
atttacaaagagaaatttattcctcctgaacttagtatttgggactactttatagcaaag
ccatatcttgcagcatcccaaactagatttgaatatgattcagaagaaagtcaggacagc
agtgatgaagatgaagatggagcattcttatcagattcaaaacttcaggaacattctaac
tcaaattcatttagttggtcattgatgcgcttggctatggttcagcttgttctccgtaac
ttgaaaagtttctacccattggctggacatgatcttacagaacttccagtttgttcaccg
ttatgccatgcagttctaaaggctcttcagcggtgggagcaggttcttctcagacgactt
gaaatgcatggaggtccaccagaaaactttatttctattcacattttacaagatgcctca
tcttcaggccctgcattacttcgccacaaagctttgctagagccaacaaacactcctttc
aaatccaaaagtcattatgcattatccgtaaaaagactttggcagtaccttgttaaacaa
gaaattgtccaagaaaccttcatcagtaacatatttgccaaaagaaagtgtttaaatgag
tcattagaagaccagtctgaatttaccaaaactagttcaggagaagaatcaggagtcaat
aagatagagcatgatgcaggatctcctggaagtaaagcaagaattatccataaagagtct
gacattattactgcctttgctgtcaataaggccaataggaattgtattgcaatagcctca
agccatgaaattcaagaactggatgtttctggaattttagcaactcagatctacacttgg
gttgatgatgatatagaagtggaagctaaaggagctgatgacttcttagttatacatact
cgtgatgacttgggaaacattcaaggaactactccttatacacacagcactcctggaaca
ccaatcaatatgccatggcttggcagcactcagactggcaggggtgctgctatgatgatc
aagaagaatctcaataatgtcagaagaatggcttcccacccaacactaccatattatttg
acaggtgcccaggatggcagtgtaagaatgtttgaatggggccattctcaacaacttgca
tgctttcgatcgggtggcaactccagaattacacggatgagatttaattatcaaggcaat
aagtttgggatcgttgatggtgatgggcatataagtttgtatcaaacaaactgtaaaggt
tgcctacataatggaagcacatccaaaccatacctaacatggcaatgccataataaaacg
gctagtgattttgttttcatcagttcttcgtctttgatagctactgccgggttatctact
gacaacagaaatatttgtctgtgggatactttggttgctccttctagtagcttggttcat
gcattcacatgtcatgatactggagcaactgttttggcatatgcacctaaacaccagcta
ttaatatctggtggaagaagaggctatacctgcttaatagatcttcgtcaaaagcaacag
agacagtttttccaaagtcatgattccccagttaaagcaattgctgtagatcctacagaa
gaatattttgttacaggatctgcagaaggaaatatcaaggtatggagtctgtcaaatttc
agtcttcttcatactttcctcaatgaacattctagacaatctattttcagaaatcttggg
acaggtgtcatgcagattgagacaggaccagcaaatcacatattttcctgtggagctgat
gggacagtgaagatgagaattttgcctgatcgatttaattcatttggtgaagtgttgaaa
actggtgtgaaatatgtgttctga
DBGET
integrated database retrieval system
