Thamnophis sirtalis (common garter snake): 106543380
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Entry
106543380 CDS
T06107
Symbol
SMYD4
Name
(RefSeq) SET and MYND domain-containing protein 4
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106543380 (SMYD4)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
106543380 (SMYD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
TPR_12
zf-MYND
TPR_2
TPR_7
TPR_19
TPR_10
TPR_NPHP3
YjcZ
Motif
Other DBs
NCBI-GeneID:
106543380
NCBI-ProteinID:
XP_013914862
UniProt:
A0A6I9XLR4
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MAERGGIWGEGPSGKHLTSSLQVCLEDIGRAQQAGSCPEKLLPKIRLRRAECLLSLGRLQ
EAAGALHSLQEGLSADQSPEAARHRALLGRLDQLRGGAGEGSGASLRPAAGPGQAPPDPE
PWEESGRVSGTSVAVSLGFSSRKGRHLVAAEDLPPGKLLVREAAFASVLCPGQSLLLQGT
LQALQDGRLANPDLHCHHCLRPLLASVPCRGCSYSRYCGPACAQLAWSGYHWAECALGGL
LLALGVFCHVAFRTVLVAGFAQVKALVTQSQQGGPPAAAEKDARPIPGCEADGRYSGSYR
AIFSLLPHTERHSPGHRFLCGLSVAALCEALEDAGLEAWIAVGATKEEPGAVEEEEEGSP
PTALEVLGEAMLRHVLQLQCNGQAVTTLRPSGPEDGLVAGSGQVRLATGFFPALSLLNHS
CDPNTSVSFAGCTAEVRALRPIPRGQELLHCYGPHRCRMGAAERRRRLLAQYFFECRCQA
CLEELQPSEAPEAALFLCPACQRPMQGRGPLRCSGETCGRLVPEEDFHRRLLRLQRLTQS
AEELLEHGQPGQALQLLQKCRLDAESFLSPAHLRRGEIEDRLAQVHAATGRWQEAAGHLR
RSIQAVEAHFGSASMEAGQEVFKLAQVLFNGRLASEALQAVWRAEAILRVHLGTESDQLQ
ELREMRTCLEGLLPTAPTAAAAAAAAQLLGEDAPVGLGNPPPAAL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgagggggcatctggggtgaaggcccctctgggaaacacctgacttcctct
ctgcaggtctgcctggaggacatcggacgggcgcagcaggcggggagctgcccagagaag
ctgctgcccaagatccggctgcgcagggccgagtgcctgctgtctctgggccggctgcag
gaagcggcaggcgccctccacagcctccaggagggcctctccgcggaccagagcccggag
gctgcccgtcatcgggcgctgctgggccggctggaccagctgcggggcggagccggggag
gggagcggggcctcccttcgcccggctgctgggcctggccaggctccaccggacccggag
ccctgggaggagagcggccgtgtctctggcacctcggtggccgtgagcctgggcttttcc
agccgcaaaggccgccacttggttgctgccgaggaccttcctcctgggaagctgctagtc
agggaagcggccttcgccagcgtcctctgtcctgggcagagcctcctgctgcaggggacc
ctccaggcgctgcaggacggccggctggccaaccccgacctccactgccaccactgcctg
cgcccgctgctggcctctgtgccctgccgagggtgcagctacagcaggtactgcggccct
gcctgtgcccagctggcgtggagtggctaccactgggcggaatgtgccctcggggggctg
ctgctggcactgggcgtcttctgccatgtggccttccggaccgtgctggtggccggcttc
gcccaagtgaaggccttggtcacccagtctcagcaggggggccccccagccgcggcagag
aaggacgcccggcccatccctggctgtgaggccgacggacggtacagcggctcctaccgg
gccatcttcagccttctgccgcacacggagcgccacagccccggccacaggttcctctgc
gggctgagcgtggcagccttgtgcgaggcgctggaggacgctggcctggaggcctggatt
gcggtgggggccacgaaggaagagccaggggctgtggaggaggaggaggaggggagcccc
cccaccgcgctggaggtcttgggggaggcgatgctgcgtcacgtcctgcagctgcagtgc
aacggccaggctgtgaccactctgcgcccgtcagggcccgaagacgggctggtggccggc
agtgggcaggtgcgcttggccacgggcttcttccccgccctcagcctgctgaaccactcc
tgcgaccccaacaccagcgtgtccttcgccggctgcaccgcggaggtcagggccctgcgc
cccatccctcgcgggcaggagctgctccactgctacgggccccacaggtgccggatgggg
gctgccgagaggcgcaggcgtctcctggctcagtacttctttgagtgccgctgtcaggcc
tgcctggaggagctgcagcccagcgaggcccccgaggccgccctcttcctctgcccggcc
tgccagaggcccatgcaggggagaggccccctccgctgctcaggtgagacctgcggccgc
ctggtccccgaggaggacttccaccgccggctgctccgccttcagcgcctgacccagtcg
gccgaggagctcctggagcacggccagccgggtcaggccctgcagctgctgcagaaatgc
cggctggatgccgagagcttcctgtctccagcgcacctgaggaggggcgagatcgaggac
cgcctggcccaggtgcacgcggcaacaggcaggtggcaggaggcggccgggcacctgcgc
aggagcatccaggccgtggaggcccatttcggcagtgccagcatggaagctggccaggaa
gtcttcaaactggcccaggtcctcttcaatgggcgcttggcctccgaagccctgcaggcc
gtctggagggccgaggcaattttacgggtgcacctgggcacagagagcgatcagctgcag
gagctgcgagagatgaggacctgcctggaggggctgctcccaaccgcccccacagcagca
gcagcagcagcagcagcccagctgctgggagaggatgccccagtgggccttggaaacccc
cctccggccgccctctaa
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