Thamnophis sirtalis (common garter snake): 106543414
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Entry
106543414 CDS
T06107
Symbol
LINGO2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106543414 (LINGO2)
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
106543414 (LINGO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
V-set
LRR_EndoS
Ig_C17orf99
LRRNT
LRR_LRWD1
LRR_9
Ig_6
Sp38
Big_6
Motif
Other DBs
NCBI-GeneID:
106543414
NCBI-ProteinID:
XP_013914898
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MLHTAISCWQPFLSLAVLLLFIGSTLGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETK
ILDLSKNRLKSINPEEFTAFPLLEEIDLSDNIVGNVEPGAFNSLFNLRSLRLKGNRLKLV
PLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFNGLLSLE
HLTLEKCNLTAVPTEALSYLHNLISLHLRHLNINLLPAYAFKRLFHLKNLEIDYWPMLDT
IPANSLYGLNLTSLSVTNTNLSTIPYVALKHLVYLTHLNLSYNPISTIESGMLADVLRLQ
ELHIVGAQLHAIEPHAFQGLRFLRVLNVSQNLLETLEENVFHSVKSLEVLCISNNPLACD
CRLLWILQRQPMLQFGGRQPMCAGPDSVKERPFKDFHSTALSFYFTCKKPRIYEKKLQYL
VVEEGQTVQFLCHAEGDPQPTIAWLTPRRRLVTAKSSGRATVLTDGTLEIRFAQDQDSGI
YVCVASNAAGNDTSSATLTVKGFASDRFLYANRTPMYMTDSNDTSSNGTNVNTFALDLKT
ILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKTTIDLEYVPRKNNGAVVEGEVSGPRR
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacacagccatatcttgctggcagccatttctaagtctggctgtgctgctactt
ttcataggctccaccctaggttgcccagctcgctgtgaatgctcagcacagaataagtct
gtcagttgtcaccggagacgcctgattgccatccctgagggcatccccatagagaccaaa
atcttggatcttagcaaaaacaggctaaagagtatcaatccggaggagttcaccgctttc
cctttgcttgaagagatagatctgagcgataacatcgtgggcaatgttgagcctggggcc
tttaacagcctatttaatttgcgttctctgcggctgaaagggaatcgtctgaagctggtc
cctttaggagtcttcaccggcttgtcaaacttaacaaagctggatattagcgagaacaag
attgtcatcctgctggattacatgttccaggacctgcacaacctcaaatcccttgaggtt
ggggataacgatctggtttacatctcccacagggcctttaatggattgctcagtctggag
cacctcactctggaaaaatgcaacctaactgctgtaccaacagaagccctttcctacctt
cacaacctcatcagcctgcacctgagacatctcaacatcaacctgttgcctgcgtatgcc
tttaagagattgttccacctgaaaaacctagaaatagattattggcctatgctcgacacg
atccctgccaacagtctttacggcctgaacctcacttctctctccgttaccaataccaat
ttgtccacaatcccttatgtcgctctgaagcacctggtttacctgacccacctgaatctt
tcctacaaccccatcagcacaatcgaatctggcatgcttgcagatgtgttgcgcctgcaa
gagttgcacatagtgggagcccagctgcacgccattgaacctcatgctttccaaggcctt
cgattcctccgcgtgttaaatgtgtcccaaaacctgttggaaactctggaagagaatgtt
ttccattctgtcaaatccctggaagttctctgcataagcaacaatcccctggcttgcgac
tgccgcttgctctggatcttacaaaggcaacccatgctgcagtttggtggccggcaaccc
atgtgtgccggtccagacagcgtcaaagagaggccatttaaagacttccacagcactgcc
ctttctttctacttcacttgcaagaagcccaggatatatgaaaagaagctgcagtacttg
gtggttgaagaagggcagacggtgcagttcttgtgtcatgccgagggagatcctcagccg
accatcgcctggttgacaccacgacggagactggtcaccgcaaaatccagcgggagagca
acggtgctcacagatggtacacttgagatccggtttgctcaagatcaagatagtgggatt
tatgtttgtgtggccagcaatgctgctggaaatgacacctcctcagccaccctcaccgtc
aaggggtttgcctcagatcgttttctttatgccaacaggactcctatgtacatgacagat
tccaatgacaccagttccaatggaaccaatgtgaatacatttgctctggaccttaagaca
atactggtgtcgacggccatgggctgtttcaccttccttggtgtggttttattttgtttc
ttactactttttgtctggagccgtgggaaaggcaagcataaaaccaccatcgacctcgag
tacgtgccccgtaaaaacaatggtgcagtggtggaaggggaggtttcaggaccacgcagg
ttcaatatgaaaatgatttga
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