Thamnophis sirtalis (common garter snake): 106543500
Help
Entry
106543500 CDS
T06107
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106543500 (CFAP43)
Cilium and associated proteins [BR:
tsr03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
106543500 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
CFAP43_N
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
106543500
NCBI-ProteinID:
XP_013915005
UniProt:
A0A6I9Y7D9
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MDPLKAGGRRPVSATHKAELEPKWVQGFTNRKVGFINNRTVSYPCGNYIIFINMETRERS
FLRCHHGNIGAFAVNASQNLVAFSDRQLNPRIYVYNFPGQKKIAKLKGQASLDYSLLAFS
HTGPYLASYSSLPEFCLSIWDWQNKVLLCSKSQPEVEITAMSFNPMNWHQLCLFNATSMT
LWSIERNNKEHILISKPVKLPIEDGSLTDEENSFFSHPNVSDLYFGPVLPNSAISGLVGD
EAETFKPKDDIQPCIHPTVHCWTPDSELYLGCEEGYFLKIGADTYRAALLTQKLSPDAIG
EPRKESQNVILLSMALHKDGLYAAGTDGFVRLYKIKGTSFQAEDCFEIEEPITTLFFSPD
YNYLLVETEKGSLYIFNPNSNEDVITLLDASMSQFLAADFIVPGNKHCVSAAKSGEIQVW
ELDNGAFISTLCLHTVVTAMACSLSSHSAAVGTPTGRVFFVDLTNVETPRVIHRILLSEN
MTVQFLRYEQTGQFLIAASTDGNVFILNALPSTLFKVLGYIVLSGEIVDITLQYNEENEL
TEVIALLSPTEFKRGRVEIFTLPLNIISDNEMCITERGLLKDSIIQKHMYELEFPLLSLV
KRKDETVLACTSPSSYICKYHLIEKQVALQQMTSKDQPIMSEKKIPSKQFGQAFLCLSPH
DKWLASAAESGLLFIHNASTLDILTSEYCHSYNGRGIKSLAFSLDSQNILVTGTQDGALV
CLKWKKLGERKMKDAVDFGTQLLVKLNHSIFSENSFIKTMEEWAITSKPTYSISFETSSP
QLHGKASIEVTDEDEYYLLTQAKSEETSWLDQKAEKAIKDETDSFDEKRKELKHGIKVLR
KKIQEMMFENSVAPKIEKLDQQEFNLDVEEQEKQQIHSASEVERVRKDIEMENLSNCYLR
EMIKKECWDTMLVKGRSIKTFHSSCEVQNYPMKGRSPEENQMLERILYLKKIESIDMKLR
KKIVEFDAQPSGVKEEGEKTEEGEEEKKIDALVGSLSATYGGNTSLLYNQLELHTREEKI
SQIILLRDIIYNIKRSFNKDFDSVARMKELEIARVKEKNIRISQIFNQLDIKEEIWVPTL
TDNEKPERALVVQESEIKVEKYLTPVQKAKNKIMARIEYKRRLASQSDNARERGLMDMMN
GVLEIKKEDILKMEIPPPPFVSKEEALWSEEERKIYKEYEKKVKELNEEREKHRKILETE
LKKLQGSIQENTQGFDEILNRLFDKKVHCEMVIYQEELKITNLLFSLLLDEELTSREVAL
HHHLNKKRKEKAISSEAVKTAKAEVDAFREAYDILIAEDKVMERGFRKEFSDLQTHHVDQ
LFKLYKRRPRALKMKVQTDTANPYGERPGSAKMYQDALAHLMKAIDEMDNPENRPEGLDI
SNWERFCAARRAKVESEQQVKQKVLTLAEMQTFLQKRMEDDEQLRKDIEHVFAEINLLRE
QKMRFQLDLMVQFLFKQGQVELEGTNLIPDYTDAILINRTIIEELNSMIWAQGQKKIASM
VESKDFRKGIFQLEWEHRKMQMQVQDLNQKARDIQKLNVTKDHQIFLSVLNYDKRMNHEV
SVMEGTFNFLDKVHKKNIEQKEKIIKELEKQIHLKEVSNQKFSKKLQEMLVIVSERRHIY
EATDSELLNQTIAKEHYEDILQRQQLVDLAKAQAQELAVLQAEVERLRMRTFPAFFDVQQ
F
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggaccctctgaaagcgggcggccgtcgcccggtatccgcgacgcacaaagccgagctg
gaacccaagtgggtacaaggattcaccaataggaaagttggatttatcaacaacaggact
gtttcttatccttgtggcaattacattatctttattaacatggaaactcgagagagatca
ttcttgcgatgtcaccatggaaatattggagcctttgcagtgaatgcaagtcagaatctt
gttgctttttctgatcggcagttgaatcctagaatctatgtttacaattttccaggacaa
aagaaaatagcaaaattaaaagggcaagccagtctagactattccttgcttgcattcagt
cacacaggtccctatctggccagttattcgtcgctgcctgagttttgcctttcaatatgg
gattggcagaacaaagtcttattatgtagtaagtcgcaacctgaggtagaaataactgca
atgagttttaatcctatgaattggcatcagttatgtttatttaatgcaacctctatgacc
ctttggagtattgaaaggaataacaaagagcacatcttgatttcaaagcctgtcaaactt
cctattgaagatggatccttaacagatgaggaaaatagcttcttttcccatcctaatgtc
agtgatctttattttggtcctgtgctacccaattcagccatatctggcttggtaggagat
gaggctgaaacgtttaagcctaaagatgatattcaaccttgtattcatccgactgtccat
tgctggactccagattctgagctgtatttgggctgcgaagaaggatatttcctgaaaata
ggtgcagacacatatagggctgctcttctcactcaaaaactttctccagatgctattggt
gaaccaaggaaggaatctcaaaatgtgatcctactttctatggcacttcataaggatgga
ctgtatgcagctggaactgacggttttgttcgcctttacaaaatcaagggcacaagcttt
caagcagaagattgctttgaaattgaagagccaataacaactcttttcttctcccctgat
tacaattacctgctagtagaaacagaaaagggatcactttatatctttaatccaaattca
aatgaagatgttattacattactggatgcaagtatgagtcagttcttagcagctgatttt
attgttccaggcaacaagcactgcgtgtctgcagcaaaatcaggagagatacaagtttgg
gagctggataatggtgcttttatcagcacactgtgtttacatacagtggttactgcgatg
gcttgtagcctctcctctcacagtgctgcagtaggaactccaacaggccgtgtctttttt
gtagatcttacaaatgttgaaactcctagagtaattcaccgaattctcctttctgagaac
atgactgtgcagtttttgcggtatgaacaaactggccaatttctcatagcagcttctaca
gatggaaatgtttttattttaaatgctctcccatcaacattgtttaaagtactgggatat
atagtgttgtctggtgagattgtggacataactttacagtataatgaagaaaatgaatta
actgaagtgattgcacttctttctccaacggagttcaaaaggggaagagtggagatattt
acacttcctctaaatattatttcagacaatgaaatgtgtattacagaaagagggctgttg
aaagacagtattattcagaagcatatgtatgaattagagttcccactactttctctggtc
aagcggaaggatgaaacagtacttgcctgtactagcccctcttcctacatctgtaaatat
catcttattgaaaaacaggtggctttacagcagatgacatcaaaagaccaaccaatcatg
tcagagaagaagataccaagcaaacagtttggacaagcattcctgtgtttgtcgcctcat
gacaaatggctagcttcagctgcagagagtgggctattgtttattcataatgcctcaact
ctggatattctgacttctgaatactgccattcatataatggacgaggaattaaatcattg
gcattctcattggatagccaaaatatacttgtcaccggaacccaagatggagctcttgtt
tgtctaaaatggaagaagcttggggaacgcaaaatgaaggatgcagttgactttgggaca
caacttctagtcaaacttaaccactctattttcagtgaaaactcatttataaaaactatg
gaagaatgggcaataacatcaaaacccacatatagcatatcatttgagactagttctcca
cagttacatggaaaagcaagcatagaagtgactgatgaagatgaatactatttacttaca
caagcaaaatccgaggagacttcatggttagatcagaaagcagagaaggcaatcaaggat
gaaactgacagttttgatgaaaagagaaaagaactaaaacatggaattaaagtgcttcgt
aaaaagattcaagaaatgatgttcgaaaattcagttgcacctaaaattgagaaactggac
caacaggaattcaatctggatgtagaggaacaagagaaacagcaaatacacagtgcttca
gaagtggaaagggtgaggaaggatatagagatggaaaatctatccaattgctatttacgt
gagatgataaaaaaagagtgttgggataccatgttggttaaaggacgttcaattaagact
ttccattcttcttgtgaagttcagaattatccaatgaaaggacggagtccagaagaaaat
caaatgttggaaagaattttgtatttaaagaagattgaatcaatagatatgaagcttcga
aaaaagattgtggaatttgatgcccaaccttcaggcgttaaagaggaaggggaaaagaca
gaagaaggagaagaagaaaaaaaaatagatgctctggttgggagtctgagcgcaacgtat
ggtgggaacacatctcttttatataaccaactggaactgcacactagagaggagaaaata
agtcaaattatattgctacgggacatcatctataacataaagagatcttttaataaggat
tttgattcagtcgcacgaatgaaagagctggaaattgcacgtgtgaaagagaagaacata
agaatatcacagatctttaaccagcttgatattaaggaagaaatctgggtgccaactctt
acagacaatgagaaaccagagcgagcactggtggttcaagaatcagagattaaagtagaa
aagtacttaactccagtgcagaaggcaaaaaacaaaatcatggctcggattgaatataaa
agacgacttgcttcccagagtgacaatgcaagagaacgtggccttatggacatgatgaat
ggtgtccttgaaataaaaaaggaagatattttgaagatggaaattccaccacctccattt
gtatcaaaagaagaagccctttggagtgaagaagaaagaaaaatatataaggagtatgaa
aagaaggttaaggaactgaatgaagaaagagaaaaacatcgaaagattctagaaactgaa
ctgaaaaagcttcagggttcaattcaggaaaatactcaaggatttgatgaaatcctgaac
aggctctttgacaaaaaagtccactgtgaaatggttatataccaggaagaactcaaaata
actaacctcctcttctcactgcttttggatgaagagctgacctcaagagaagttgcactc
catcaccaccttaataaaaaaaggaaggaaaaggcaatatccagtgaagcagtaaagaca
gctaaagcagaagtggatgcttttagagaagcctacgacatattaattgctgaagacaaa
gttatggaacgtggttttagaaaggaattttcagatcttcaaactcatcatgttgatcaa
ctattcaaactttataaacgtcgaccaagggctttgaagatgaaagtacaaacagatact
gcaaacccatatggggaacggccaggctctgccaaaatgtatcaggatgctctcgcccat
ttaatgaaagcaattgatgaaatggacaatcctgaaaacagacctgaggggcttgacatc
agtaactgggaacgcttttgtgcagctaggcgagcgaaagtagaaagtgaacagcaagtg
aagcaaaaagtactgacactagcagagatgcaaactttccttcaaaaaagaatggaagat
gatgaacagctgcggaaagacattgaacatgtttttgctgagatcaatttgcttcgggag
cagaaaatgagatttcaattagatttgatggtccagtttctttttaaacaaggacaagtg
gaactagaaggcaccaacttaataccagattacacagatgctattctgatcaacaggact
attattgaagagctaaacagcatgatctgggctcaaggacaaaaaaagattgccagtatg
gtagaaagtaaagatttccgtaaagggatatttcagctggaatgggaacatcgaaaaatg
cagatgcaagtacaagatctgaatcaaaaggctcgagatatacaaaaactaaatgttaca
aaagatcatcagattttcttatcagtcttaaactatgataagcggatgaatcatgaagta
tcagtaatggaaggaacatttaactttctagacaaggttcacaaaaaaaatatagaacaa
aaagaaaaaataattaaagaattagaaaaacaaatacacttaaaagaggtatcaaaccag
aagttcagcaagaaattacaagaaatgcttgttattgtatcagaaaggcggcacatttat
gaggctactgactcagaactactgaaccaaaccattgctaaggagcattatgaggacatt
ctacaacgacagcaattagtagatcttgcaaaagcacaagcccaggagttggccgtcctt
caagctgaagtggaaagattgagaatgagaacatttccagctttctttgatgtgcaacaa
ttttag
DBGET
integrated database retrieval system
