Thamnophis sirtalis (common garter snake): 106543541
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Entry
106543541 CDS
T06107
Name
(RefSeq) cadherin-23-like
KO
K06813
cadherin 23
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106543541
04515 Cell adhesion molecules [BR:
tsr04515
]
106543541
Cilium and associated proteins [BR:
tsr03037
]
Primary cilia and associated proteins
USH complex and associated proteins
106543541
Cell adhesion molecules [BR:
tsr04515
]
Cadherins
Major cadherins
106543541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
PCDH15_12th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
106543541
NCBI-ProteinID:
XP_013915061
UniProt:
A0A6I9XMA6
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MRLDREKQAAYSLIIVACDQGQPPYETMQPLQVALDDIDDNEPVFLKPPKGSPLYQVLSV
PEHSRPGTVVGNVTGAMDADEGTNAIVYYYIAAGNRENNFQLSREGKLQVLRDLDREKQS
FYSIIVKASSNRNWNPPQGRRAARLQAMDLSTDDTLQDVRIFLSDINDQSPRFTKSEYTA
GVATDAKVGSELIKLVALDADIGNNSLVLYSILGIRYIKQQSNDSDEVANIFSIGNLDGI
LRTFDLFTAYNPGYFVVDVMASDLAGHNDTTVVGIYILRDDQRVKIIINEIPDKVRQFEE
EFISLLSNITGAIVNTDDVQFHVDKKGRVNFAQTELLIHVVNRETNRILDVERRLQSYER
FNLTVVATDKGRPPLWGTTMLQLDVIDINDNRPVFVRPPNGTILHIKEMAIIILAILLFL
AAMLFILMNWYYRTAHKRKLKAIVAGSAGNRDFMDIMDMPNTNKYSFDGANPVWLDPFCR
NLELAAQAEHEDDLPENLSEITDLWNSPTRTHGTFGRGPSASKPEEDRYLRAAIQEYDNI
AKLGQIMREGPIKLIQNDLDDEEEEPRSPSQGSLRFRHQQPIELKGPDGIHVVHGSTGTL
LTSDLNSLPEDDQKILARSLETLTAEGGSYSDRNARTESAKSTPMHKMREVIMESPLEIT
EL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagactggaccgggagaagcaagccgcgtacagtttaatcattgtggcatgtgatcaa
ggtcaaccaccctatgagacgatgcaacccctccaggtagcgctggatgatattgacgac
aatgaacctgtcttcctgaagccacctaaggggagccccctttaccaagttctttctgtg
cctgaacactcacggccgggcaccgtggtggggaatgtcactggcgcaatggatgctgac
gagggcaccaatgctattgtgtattactacattgcagctggtaacagggagaacaatttc
caactgagtcgggaagggaaactgcaggttcttcgggacttggaccgagagaaacaaagt
ttctattccatcatcgtcaaagcttccagcaatcgaaactggaaccctcctcaaggtcgc
cgagcagccagactccaggctatggatctcagcactgatgacaccttacaagatgtccgg
atctttctgtctgacattaatgatcagtctccccgcttcacgaaatcggaatacacagca
ggggttgcgaccgatgcaaaagtgggttcggagctgatcaaacttgtagcgctggatgct
gatattgggaacaacagcctagtcttgtacagcattctgggaattcggtacatcaaacaa
cagtcaaatgattctgacgaggtggccaacattttcagcattggtaacctagatggaatt
cttcgaacatttgatctgttcactgcttacaaccctggctactttgtggtggatgtcatg
gcttctgatctggctggccacaatgacactacagttgtgggaatttacatcctgagagat
gaccaacgggtaaagatcataatcaatgagatccccgataaagtacggcagtttgaggag
gaattcatcagcctgttgtccaacataacaggggccattgtcaatacagatgatgtgcag
ttccatgttgataaaaaaggccgtgtgaattttgcccagacagaattgctgatccatgtg
gtaaaccgggagaccaacaggatacttgatgtagaaagacgcctacagtcctatgagagg
ttcaacctaacggtggtagctactgacaaaggaaggccaccactctgggggactacaatg
ctacaactggatgttattgacatcaatgacaatcggccagtgtttgtccgccctcccaat
ggtaccattctgcacattaaagagatggcaataatcattctggctattctcctcttcctg
gcagccatgttgttcatcctcatgaattggtactacagaactgcacacaaaagaaaattg
aaagcaattgtcgctggttccgcaggtaaccgagatttcatggacatcatggatatgcca
aacacaaacaaatattcctttgatggagcaaaccctgtgtggctggacccattctgcaga
aatctggaattggcagcacaagctgaacatgaagatgacctacctgagaacctgagtgaa
atcacagacttatggaatagtcccaccaggacccatggaaccttcgggcgaggcccttca
gcttccaagccagaagaagatcgctatctgagggcagctattcaggagtacgataatatt
gcaaagctaggccagatcatgagagaagggcctatcaagctgatacagaatgatctggat
gatgaggaggaagaaccaaggagccctagtcaagggagtcttcgctttcggcatcagcag
cctattgagctcaagggacctgatggcatccatgtggtccatggtagcacaggcacactc
ctcacctcggacctcaacagccttcctgaggatgatcagaaaatactagctcgctcctta
gagacactgactgctgaaggtgggtcctacagtgacagaaatgctcgtacagagtctgcc
aaatccacccctatgcacaagatgagagaagtgatcatggagagcccactggagatcacg
gagttatga
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