Thamnophis sirtalis (common garter snake): 106543595
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Entry
106543595 CDS
T06107
Symbol
GJA1
Name
(RefSeq) gap junction alpha-1 protein
KO
K07372
gap junction alpha-1 protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
106543595 (GJA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsr02000
]
106543595 (GJA1)
Transporters [BR:
tsr02000
]
Other transporters
Pores ion channels [TC:
1
]
106543595 (GJA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Connexin
Connexin43
Connexin40_C
Ammonium_transp
Motif
Other DBs
NCBI-GeneID:
106543595
NCBI-ProteinID:
XP_013915122
UniProt:
A0A6I9XMI8
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MGDWSALGRLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPG
CENVCYDKSFPISHVRFWVLQFIFVSVPTLLYLAHVFYVMRKEEKLNRKEEALKVVQGEG
VNVDLPLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISILFKSFFEVAFVVIQWYIYGFT
LQAIYTCERVPCPHKVDCFLSRPTEKTIFIIFMLVVSIVSLSLNIIEIFYVTLKSVKDRM
KSKGNPFSPNSGLSPSKDCGSPKYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNNTSSCRN
YNKQASEQNWANYSAEQNRIGQAGSTISNSHAQNFEFNDEPESTKKLGSGHELQPLTVVD
QRPPSRASSRASSRPRPDDLEI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactggagtgctcttggtaggctccttgacaaagtccaagcctattctactgct
ggaggaaaggtgtggctgtctgtccttttcattttccgaattttgcttctggggactgca
gtggaatctgcctggggagatgaacagtcagctttccgatgcaacactcaacaaccaggt
tgtgaaaatgtctgttatgacaaatcatttccgatatctcatgtgcgtttctgggtgctg
cagttcatttttgtttcggtgccaacccttttgtatttagcacatgtcttctatgtgatg
cgaaaagaagagaaactaaaccggaaagaggaagcactcaaggtggtccaaggtgaagga
gtaaatgtagacctccctctaaagcagatagaaattaagaaattcaagtatgggattgaa
gaacatggcaaggtcaaaatgcgtggtggactgcttcgtacttacatcatcagcatcctt
ttcaaatctttctttgaggtggcctttgtggtgatacagtggtacatctatggattcact
ctgcaagccatctacacttgtgaacgggtaccatgtccacacaaagtcgattgcttcctc
tctcgtcccacagagaaaaccatctttattatcttcatgctggtagtatctatcgtatct
ctgtccctcaacatcattgagattttttatgtcactctcaagagcgttaaagatcgcatg
aagtccaaaggcaatcctttctctcctaacagcggcttaagtccctccaaagattgtgga
tctcccaaatatgcctacttcaacgggtgctcctctccaacggcccccttgtctcccatg
tctccaccaggatacaagcttgtaactggagataggaacaatacgtcatcctgtcgcaac
tacaataaacaagccagtgaacaaaactgggcaaactatagtgctgagcagaataggatt
ggacaagccgggagcaccatttccaactcacacgcccagaactttgaatttaatgatgag
ccggagagcacgaaaaaattgggctctggccatgagctccaacctctcacagttgtagac
cagcggccaccaagtcgagccagcagtcgagcaagcagcagaccacgacctgatgattta
gagatctag
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