Thamnophis sirtalis (common garter snake): 106543619
Help
Entry
106543619 CDS
T06107
Symbol
HPS1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106543619 (HPS1)
Membrane trafficking [BR:
tsr04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
106543619 (HPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
106543619
NCBI-ProteinID:
XP_013915153
UniProt:
A0A6I9XHG3
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MKCVLISSEGAEVLFYWADPDFLAMLQQRFGIQDQNGDEIPSVEDSINTLFAPMIISCGT
MLEKLGDTYTCFSAENGKHLYVLHMFGECLYIAMNGDGRESEDDLRRQLYVLRRLTEAHF
GLVTLDSHLFHRELRPVETEQRAHIWGLFQSLLQTYNQLHEEDQSFAVEAVERLIHPQLC
EQCIEFLERQVVQYINSNTERAGHEVVHAFLLIHTKLLAFYSSRNASSLRPADLLTLLLI
VQDLYPSSFKDQPVPEVFAQPIEGEISLQRPQSSESIPVNSPLYHSTSEEQIADDLSMPE
EFFTPKASPSQQSTGSAWTEGVDSQSDGEVNSADFLLAEDMLHIVESPASEATNPRRIFL
DVNLKEGYCPMMPHTMHCLSLWPGILLVLLTKNPSSQVALSLYQLLDGILMIEKKLKEGQ
ESRQPLRSQPLFLELRHRMDKFVKKLGGQESQLQNTWQELKNKISSRSEPGTSLELLQAF
CNVRRQLCAVYRLLFLGSPGAQGLPQNLLERVQQFTQDKLKDWKDFLLVKSKRNVTMVSY
LENFPGLVHFIYVDRTVGQMVAPSLGISEESSSELGKGPLLQFIKKKVWSLVALARSFLQ
KGYTTLMVRDGDYYCTYFLWFENELGYKLEVMEVPVLSDDSVPIGTLAGDYYRKLLRYFG
RKHANEVVKCYELLTIHLGIMPNEVMIQQARSLAQQLWEPTRIPLL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtgtcctcatttccagtgagggtgctgaagtccttttctattgggcagatcca
gactttttggcaatgctacagcagcgatttggaatccaggatcagaatggtgatgaaata
ccttctgtggaagacagcatcaacacattgtttgcccccatgatcatctcctgtggaact
atgctagaaaaattaggagacacatacacttgcttctctgctgaaaatggcaagcatcta
tatgtgctgcatatgtttggcgagtgcctgtacattgccatgaatggagatggccgtgag
agtgaggatgatttgcgccgtcagctctatgtgctcagaagattaaccgaggctcacttt
ggcctagtcacactggacagtcacctcttccatcgggaacttcgcccagtagaaactgaa
caacgagctcacatctgggggctttttcagagcttgctgcagacttataaccagctgcat
gaggaagaccagagttttgctgtagaggctgtagagcggctgatccacccacaactgtgt
gaacagtgtattgaattcttggagcggcaagttgtacagtacatcaatagcaacacggaa
cgtgctggacatgaagtagtgcatgctttcctgctcatacacactaaactacttgccttt
tactccagccggaatgccagctctctgcgaccagctgacttgctcactctgctcctgatt
gtgcaggatctatatcccagctcttttaaggaccagcctgttcctgaagtgtttgcacag
cctatagaaggagaaataagtcttcagagacctcaaagcagtgagagtattccagtgaac
agtcctctttaccacagcacttctgaagagcagatagcagatgatctctctatgcctgaa
gagttcttcacccccaaggcttcccctagccaacagagcacgggaagtgcctggactgag
ggtgtggattcacagagtgatggagaggtaaattctgctgatttcttgctggctgaggat
atgctgcacattgtagaatccccagcctcagaagctacaaacccacggagaatatttctg
gatgtcaacttgaaagaaggctattgccccatgatgccacacacaatgcactgcctctca
ctctggccaggcatcttgctggtactcctcacaaagaaccccagttcccaagtggccctt
tctctctaccaattgctggatggaatcctgatgatagagaagaaattgaaagagggacag
gagagccggcaacctctgcgttctcagcctttatttttggagctccgacatagaatggac
aaatttgtcaagaagctgggtgggcaagagtcacagttacagaatacatggcaggagtta
aagaacaaaatttcctctcgaagtgagcctgggacttccttggagcttttgcaggcattt
tgcaacgtccggcgacagctttgtgctgtgtaccggcttctcttccttggatctccaggg
gcccaaggcctgcctcagaacttgctggagcgggtgcagcaattcacacaggacaagctc
aaagactggaaagacttcttactggtgaagagcaagcgcaatgtcaccatggtgtcatat
ttggaaaatttcccagggcttgtgcatttcatctatgtggatcgtacagtaggacaaatg
gtggctccatcacttggcatatcagaggaatcttcttcagaattaggcaaaggaccttta
cttcaatttataaagaagaaggtatggtcactggtggctttagcgcgaagcttcttgcag
aagggatacactacactgatggtccgggatggagattactattgtacctacttcctctgg
tttgagaacgagctgggatataagctggaggttatggaagtgccagtgctttctgatgat
tcagttcccattgggacactggcaggtgattattacaggaaactgctccgttattttggc
aggaaacatgccaatgaagtggtgaagtgctatgagctgctgaccatccatctgggcatc
atgccgaatgaagttatgatccagcaggcacgcagcttggcccagcaactctgggagcca
acacgtatccccttgctttag
DBGET
integrated database retrieval system
