Thamnophis sirtalis (common garter snake): 106543691
Help
Entry
106543691 CDS
T06107
Symbol
NCOA2
Name
(RefSeq) nuclear receptor coactivator 2 isoform X1
KO
K11255
nuclear receptor coactivator 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106543691 (NCOA2)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
106543691 (NCOA2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NCOA
NCOA_u2
PAS_11
DUF4927
DUF1518
SRC-1
Nuc_rec_co-act
PAS_3
PAS
PAS_9
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
106543691
NCBI-ProteinID:
XP_013915225
UniProt:
A0A6I9XMT4
LinkDB
All DBs
Position
Unknown
AA seq
1469 aa
AA seq
DB search
MSGIGENSSDPARAELRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFANFNDI
DNFNFKPDKCAILKETVKQIRQIKEQEKAAAANEDEVQKADVSSTGQSVIDKDALGPMML
EALDGFFFVVNPEGNVVFVSENVTQYLRYNQEELMNTRVYNILHVGDHNEFVRNLLPNSR
MNGGSWSGESPRRNSHTFNCRMLVKPLTDSEEESHENQEAHQKYETMQCFAVSQPKSIKE
DGEDLQSCLICVARRVPMKERPLLPSSETFSTRQDLQGKITSLDTSTMRAAMKPGWEDVV
RRCIQRFYAQHEGDISFAKRHHQEVLRQGLAFSPVYRFSLSDGTIVAAQTKSKLIRSQTT
SEPQLVISLHMLHREQNVCGMNQDLTGQVLGKPLNTISSNSPAHQAMCSGNPGQDMTINS
NMNFAINGPKEQMGMPTSRFSSSGGMNHVSSIQTSTPQGSNYALKMNSPSQNSPGMTPGQ
PNSMLSPRHRVSPGVAGSPRIPPNQFSPAGNLHSPVGVCSSTGNSHSYTNSSLNALQALS
EGHGVSLGSSLASPDIKMGNLQNSPVSMNPPQLTKMGNLDSKDSFGLHGEQSEETTGQAE
SVCHSGEQKENNDNMSQVGSERPDGQNRLHDGKSQTKLLQLLTTKSDQMEPSSLANTMGD
ANKDSMGSLSGSGSAHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELNQETSSTA
PGSEITCKQEPVSPKKKENALLRYLLDKDDTKEIGLPDITPKLERSDSKTDPSSSTVKPV
AIKTEKEEMRFEPNEQPGSELDNLEEILDDLQNSQLSQLFPDTRQVASAGSVDKQAIIND
LMQITGDNSPGTPVGSQKPTGRISQSTFTNARQAQLGRMLPNQNLQLDIALQNAPGAATF
PPIRNNSPYSVIPQPSMLGSQGMMGNQGNLGNNNPGMIAGNTPRPAMSSGDWGSQAAAVR
VTCAATTSAMNRPIQGGMIRNPTPSLPLRSNSQAVPRQILQSQVMNMGGSELEMNMGAPQ
YTQQQAPPNQTAPWPDSILPIDQASFSSQNSCSSSCALCRQPFVGSPDDLMCQHPVSESP
SDEGALFDQLYMALRNFDGLEEIDRALGIPELVSQQTQGVDPESFSNQEPNIILEQKAPV
FTQQYASQAQMAQGNYTPLQDPNFHPMAQRPGYAALRMQPRPGLRPTGLVQNPPNQLRLQ
LQHRLQAQQNRQPLINQIGNVSSMNLSLRPGVPTQGNINSQMLAQRQRELLSQHLRHRQM
HQVQQRTLMMRGQSMNMTPSMVASGGIPATMSNPRIPQTNPQQFPFPPNYGINQQPDPGF
TGATTPQSPLMSPRMAHTQNPLIQQSQANPAYQSSTEINGWGQGNIGGNSMFSQQSPPHF
GQQANTSIYNNNMSINVSMVANSAGLNNMNQMTGQISMTSATSVPTSGLPSMGPEQVNDP
AMRGGSLFPNQLPGMDMIKQEGDASRKYC
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaattggtgaaaattcctctgacccagctcgggcagagttgagaaaacgtaag
gaatgtcctgatcaacttggaccgagtcctaaaagaagcactgaaaagcgtaatcgtgaa
caagagaataagtatatagaagagcttgcagagctgatttttgctaattttaatgatatt
gacaactttaacttcaaacctgacaaatgtgcaatcttgaaagaaactgtgaaacagatt
cgtcaaataaaagaacaagagaaagcagcagcagccaatgaggatgaagtgcagaaagct
gatgtgtcatccacaggtcagagtgtaattgacaaggatgcacttggaccaatgatgctt
gaggccctggatggattcttcttcgtagtgaatccagaaggtaatgtggtatttgtatca
gagaatgtgacacagtatttacggtacaatcaggaagaattaatgaacacaagagtatat
aacatcctacatgttggagaccataatgaatttgtcagaaacctgctgccaaactctcga
atgaatggcggatcttggtctggtgaatctcctaggcgcaatagccatacttttaactgt
cggatgttagtaaaacctttaaccgattctgaagaagaaagtcatgaaaaccaggaagca
catcagaaatatgaaactatgcagtgctttgcggtttctcaaccaaagtccatcaaggaa
gatggtgaagatctgcaatcttgcttgatttgtgtggcacgaagagttccaatgaaggaa
aggccacttctgccctcctcagagacttttagtactcgtcaggatttacaaggcaaaata
acgtcactggacactagtaccatgagagcagctatgaaacctggttgggaagatgtggtg
agaaggtgcattcagagattctatgcacaacatgagggagatatatcttttgctaagagg
catcaccaagaggtgctgaggcagggattagcattcagtcctgtgtatcgattttctttg
tctgatggcactatagttgctgcccaaacgaagagcaagctcatccgctcccagactact
agcgaacctcagcttgtaatatctttacatatgcttcacagggaacagaatgtctgtggg
atgaaccaggatttaactggacaagtactgggaaagccattgaacacaattagctctaac
agtcctgcccatcaagccatgtgcagtgggaatccaggtcaggatatgaccatcaatagc
aatatgaattttgccataaatggcccaaaggaacaaatgggtatgccaacaagcaggttt
agtagttcaggtgggatgaaccatgtgtcaagtatacaaacatccactcctcagggtagt
aactatgcactaaaaatgaatagtccttctcaaaacagccctggcatgacacctggccag
ccaaactctatgctttccccaaggcatcgtgtgagtcctggagtggcaggaagtcctcgg
atcccacccaaccagttttctcctgcaggaaacttgcattcacctgttggagtttgcagc
agcacaggaaatagccatagttataccaacagttccctcaatgcacttcaggctctcagt
gaggggcatggagtctctctgggatcttcgttggcttcacctgatataaaaatgggtaat
ttacagaattcccctgtaagtatgaatcctccccagctaactaaaatgggaaatctggat
tctaaagatagctttggattgcatggggaacaatcggaagaaacaactggacaagcggaa
agtgtctgccattcaggagaacagaaagaaaataatgacaacatgtcccaagttggcagt
gaaagacctgatggacagaacagactgcatgatggcaaaagccagacaaagctcttacag
ctgctgaccaccaaatctgatcagatggagccttcatctttggctaatactatgggagat
gctaacaaggactccatgggaagtttatctggttctggctcagcacatggaacctcgctc
aaggagaagcataaaattttgcacaggctcttgcaggacagcagttctcctgtagatttg
gccaagctcacagcagaggccacaggcaaagaactgaaccaggagaccagtagcacagct
ccaggttcagagataacttgtaaacaggaaccagtgagtcccaagaagaaagaaaatgca
ctacttcgttacttgctagataaagatgatacaaaagaaattggtttaccagacattacc
cccaaactggaaaggtcggacagtaagacagacccttccagtagcacagtaaagccagta
gctattaagactgaaaaagaagagatgcgctttgagccgaatgaacagcctggcagcgag
cttgataacctggaagaaattctagatgatctacagaatagccagttgtcacaacttttc
ccagatacccgacaagttgcttcagcaggatcagttgacaaacaagccatcatcaatgac
ctcatgcagattacaggtgacaacagtcctggcacacctgttggatcccagaaacccaca
gggaggatctctcagagcacttttaccaatgcaagacaagcgcagttgggaaggatgttg
ccgaaccagaacttgcagcttgacattgctttgcaaaatgcaccaggtgctgcaactttt
ccacccataagaaacaatagtccatattcagtgatacctcagcccagcatgttgggtagt
caaggaatgatgggaaatcaaggaaatcttgggaataataatccaggaatgattgctggt
aatactcctcggcccgctatgtcatcaggagactggggtagccaagctgctgctgtgaga
gtgacttgtgccgccacaacaagtgccatgaacaggccaatccaaggaggcatgatacgt
aacccaacacccagccttcccttgagatctaacagtcaagctgttccaagacaaatttta
caatctcaagttatgaatatgggcggttcagaactggagatgaatatgggagcccctcag
tacacccaacagcaagcccctcccaatcagactgctccttggcctgacagtatattgccc
attgatcaggcatcgtttagtagtcagaacagttgctcatcaagctgtgccctttgtagg
caaccatttgtaggctctccggatgatttgatgtgtcagcatcctgtctctgagtctcca
agtgatgaaggagctctctttgatcagctttatatggcactaaggaattttgatggtcta
gaagaaattgatagagctcttggaataccagaacttgtcagccagcagacccaaggagtg
gatccagaatcattctcaaaccaggaaccaaacatcattctagaacaaaaggcaccagtt
ttcacacaacagtatgcatctcaggctcaaatggcccaaggcaattacacaccactgcag
gacccaaactttcacccaatggcacagcgcccaggttatgcagcactacggatgcaacct
aggcctggtctgaggcctactggtctagtacaaaacccgcccaatcaactgagattgcag
ttgcagcatcggcttcaagcccagcagaatcgccagccattgatcaatcagattggcaat
gtttccagtatgaacctgtctctaagacctggagtacctacacagggaaatattaattct
caaatgttagcccagaggcagagagagctactgagccaacacctgaggcacagacagatg
caccaagttcaacagagaaccctgatgatgcggggccagagtatgaatatgacgccaagt
atggtggcctctgggggaataccagcaaccatgagtaacccacggattccccagacaaac
ccccagcagtttccatttcctccaaattatggaataaatcagcagcctgatccaggcttc
actggagctaccactccacagagtcccctgatgtccccaagaatggctcatactcagaat
cctttgatacagcaatctcaggccaatcctgcctatcagtcttctacagagataaacgga
tggggacaaggcaatattggtggaaatagcatgttttcacaacaatctccaccacacttt
gggcagcaagcaaataccagcatatacaataacaacatgagcatcaatgtgtccatggtg
gccaacagtgctgggttgaacaacatgaaccagatgacagggcagatcagcatgacctct
gcaacctctgtgcctacatcagggttgccctccatgggtcccgagcaggtcaatgatcct
gcgatgagaggaggcagtctttttccaaaccaactacctggaatggacatgataaagcag
gagggagatgcatcacggaaatattgctga
DBGET
integrated database retrieval system
