Thamnophis sirtalis (common garter snake): 106543699
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Entry
106543699 CDS
T06107
Name
(RefSeq) pericentrin-like
KO
K16481
pericentrin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106543699
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106543699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PACT_coil_coil
Motif
Other DBs
NCBI-GeneID:
106543699
NCBI-ProteinID:
XP_013915238
UniProt:
A0A6I9XX91
LinkDB
All DBs
Position
Unknown
AA seq
2645 aa
AA seq
DB search
MVSDCSGSFSPSGTGIPPGWSGEGSGTQHPQKAGLYPSHYPWRGVSQSLSQLSVIKRFLQ
GAANLRPLVIHRFPSCDLPPGIPGDTFRTCQRELKIQLLARTSHVEELEYLKKDYQLKWD
KKKTEHEIELEQLRLYFEQKLKSVEENYREELTMLHQRLQEVKDYSIEEMEKSQEQDMEF
GPSITLLEEMTERERLDLFEQLTQQLEHYKVSYQAINSIWDKLQESCQMALKLLLTMVQS
TKDMEDLIFKKIGLCLDDSLASGVSQEIIAEETLLSHPLKTIDQWKLKNNNRICQGEVSD
QTLQEHSFDSLELSEHLCESIFENPELIFENEERIKKIGRCLYITVEKLLDMLAESTKQL
EEMHNIHSNIKEECKNKNWEACQMLNEQHGLMGFFDEESKAQNQLVLELHKAKVSSFSEI
SKIRQQSTQDARRQIETEVAQRLLLLENEYKNALQLEKQSISSQQEEIEELKKKNSELKE
IGIVQEKNVKEELEQIKHKLIEDDTAELKTRKLLQEVEQTHKAEAEEWRHEKEILVAEAE
EQLLLLRKELQNKAEYEKQTWQRQFDFQKAEMTCLQEQQAALIVELQKTLKEQQNTIQQL
EDSLVNTQKTLAQCNSELSSTKTLMAEELKKAKQVLEEEYKAKHKEAQSRFVIFSITSNN
SFPRKSMTGKIASHWGKFAPSCAPAAPRPSPFTPCRHLYVIPNLHSTSHIPLYILPILME
AETTVVKDAESDLAQVKSSYHFSDLSDLQHSAVLMLKNVVFLVRLFFLYVLELIKEIDRL
AKTNLELQCQADKDCSNLNTQMKILEIELEDQLKKNQNLAAMASEVIDLRQQMEALERQL
KNQRDFMDKQAIEREHERDEFQEEIWKLEMELKLTTKSQASGKSRTDLVESLHNEIKERV
DDYNRLFTEKEQIEKLLAARNEEIEKLEGQVMEFQCLNKEVAKNVDKLMQELEKMKKREI
ELKEDKGTLQQQHNKHLILISTLQSKLDEVRHRVLIDTNKDHMLKEQLKMQEELTTKKGE
VADLLEQLGKFKDNLMNKNEEILQLKSKLEVEKNANNNKLIQLKEENAHLKENIEKLAIQ
CQNPGENELVILQFLKSLLEEKNQETDHLNEQIERLEQKIESSKENEVLKKQMLETEVMK
STIEELHSEKEHLLRNKAEEIEELHKIIKKLQKESGALIPIHHGTKNRQGNPNYFSLEEP
EENLNKFKEGSQSVLENENGDDNCVRLSTSQNELQRQLDMSLMDKETSQQLLNENESQFK
MEFKILEQNLETLQESPRQHCSELTSLQLLYKELQEQHMLLKVYVMQKEDEMEEINSCSQ
DLEVHQREREMKLLGTELQLQIEQNVEQAAKVQHMTENIVKLENELKIMTQAVHNNETTY
QRKINELQVTVAELKAEIEKKVEELELLRSEKDMFHSQLKIPIENDQDNYQKEVTCPKTL
DVDVFLPSEEKEKGGEERDLSNMLSASVDFFIPMEEDSVNNLQISSRNPNIHSKQLQDIP
FIQRKQTDCSDVQQNLKLRFKNTCQSNQDSQNSQISQTIPNCFQNIIMNKTLWDSPENMR
KENPNLEFQASLSLTPFSEVDVMHSIAFESLCSENSIIQEDTPRVLEYPVSYSNSNEDTA
ANPHVLSSVFSESTSSVNKCSGLQENVSINNTEISLIPPELQDGLKVTMSRLHHASTEYG
SNTSLDLILQLNQAEPKNKVCQNSNVMAPLQCFGMTPDVTAPTLQETEMMSQQLKTVLKM
VYDESYKMLVLSEKSLPLDDGDKIQQGPSVEGWQRERLILVDIIQSLKNNLKQSNKENKV
ADLLEQLGKFKDNLMNKNEEILQLKSKCHSSALENKERSITAALENLQREYLKNKELQIK
LDEQQKQHKIKEDEKSKAIEELQAALELQCIQNNQLTVALEHEQSANSNLHKELQIEHSR
CEALLSKDQNKLLELQKNLDIEKKQNADMLTALNHERVLTEQLTMRLNECGSCKHKDSMQ
ELQEQLHLEKSNSMKLLAIIEKSQQQIFDSKKHMEEMHLHCKDFQQEQALQNTIQVTGSM
MQNKKQDVVHTLEVQREKEVETKMGWKQLQSAVKSMRDQEIRTVQGERKMAQEQQTECHC
LRALLEAQENQTESTLQYLHNSVRFKELQQMLEDLKNQEKLLKRYNQFPSKNNYTNLTFT
TDTVRLHVEQQILENIREQLVLVAAYLSEFIYKTIDKTVNWSASNDKIVAALLHILEIKE
LLASSKPVVIPTSIIHSMQESEGFIHQDKCVLQNGLKATNYAATKTNVPENKQTLMSTPK
IQKLYRKYLRAESFRKALVYQKKYLLLLLGGFQECEQATLSLIARMGIYPSPPDLNVSET
RSHFFTKFRSAVRVVIAILRLKFLVRKWHKVNKKEMPLEAISSSLGRNSYPVASLEVQKQ
PQPFPSYAAPEGEYCNRNNLMRLASCTVKSLHHLHNRSTSFTSQTSSKDTEDSLTEYIAH
LEAIQERLGILLPGTNCSGCLGIGDVQSSIEPRRIDIFCGKKLASLSYGSGPHVVLATTG
SSSLVRATQGVKFKSAKQLSVKLSCVSQHTKEAAGGTGHLTSSTDQGHSSCAQGPRTPGV
LLLAVRGAKSLGGMETHSGSQSLEPIRHLSTVQGTLLAVHLGEHLQGRPLLGGPHGGISA
YSHPS
NT seq
7938 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgattgctcaggtagcttcagtccctcaggtactggaattcctccaggatgg
tctggagaagggtctggcacacagcaccctcagaaggcaggtctctaccctagccactat
ccttggaggggggtgtcccagtccctgtcccagctctcggtcattaagaggttcctccaa
ggggcagctaaccttcggcctctggtgatccaccgttttccctcttgtgacctccctcca
ggcattcctggagacacctttcgaacctgtcagagagaactgaaaatacagctgcttgct
cgtacctcacatgtggaagaactggaatatctaaaaaaagattatcaacttaaatgggat
aaaaaaaagactgaacatgaaattgagttggaacaactaagactttattttgaacagaaa
ttaaagtctgtggaagaaaattacagagaagaattaacaatgttgcatcagagattgcaa
gaagtaaaagattattccatagaggagatggaaaaatcacaagaacaagatatggaattt
ggcccttctattacactattggaagaaatgacagaaagagagagattggatttgtttgaa
cagttaactcagcaattggagcactataaggtcagttaccaagcaataaatagtatttgg
gataaactacaagaatcttgtcagatggctttgaaattacttctgacaatggtgcagtcc
acaaaagatatggaagatcttatcttcaagaaaattggcctttgtcttgatgacagcttg
gcatctggagtgtcgcaagagatcatagctgaagaaacattactttcacacccattgaaa
acaatagatcaatggaaattaaagaataacaatagaatttgccaaggtgaagtttctgat
caaacactacaggaacacagctttgattctttggaattgagtgagcatttatgtgaaagt
atttttgaaaatccagaacttatatttgaaaatgaagagaggattaaaaaaattggtcgt
tgtttatatattactgtggagaaacttcttgatatgcttgctgaatcaaccaaacaactg
gaggaaatgcacaatatccatagtaatattaaagaggaatgcaagaataagaattgggaa
gcatgccaaatgcttaatgaacagcatggattaatgggcttttttgatgaagagagtaaa
gctcagaatcaacttgtgttagagcttcataaagcaaaagtttcatcattttcagagatt
tctaaaattcgtcaacaaagtactcaagatgctagacgtcagatagaaacagaagtggca
cagcgactcttgttattagagaatgaatacaagaatgcccttcagcttgagaagcaatcc
atttctagtcaacaagaagaaatagaagaactgaagaaaaaaaattctgaattaaaagaa
atcggcatagtacaagaaaagaatgtgaaagaagaattagaacagattaagcataaacta
attgaagatgatacagctgaattaaaaactagaaaattgctccaggaagtggaacagact
cataaagcagaagctgaagaatggagacatgaaaaggagatattggtagcagaagctgaa
gaacaattattattacttcgtaaagagcttcagaacaaggcagaatatgagaagcaaaca
tggcaaagacagtttgactttcaaaaagcagaaatgacttgtcttcaagaacagcaggct
gctctaattgtagaattacagaaaactctaaaggagcaacagaatactatccagcagtta
gaagacagtttagtgaatacacagaagactttggctcaatgtaacagtgaattatcttcc
acaaagaccctcatggccgaagaattaaaaaaagccaaacaagttttagaagaagaatat
aaggctaaacataaagaagcacaaagcaggtttgtaattttttctattacttctaataat
agcttccccagaaagtcaatgacagggaagattgcaagtcattggggtaagtttgcccca
tcttgtgcacccgctgcacccaggccctccccattcacaccatgccgacacttatatgtc
attcccaatctgcacagtacctctcacataccattgtacatcctccctattctcatggaa
gcagagactacagtagtgaaagatgcagaatctgatttagcccaagtaaaatcatcatac
catttttctgatctctcagatcttcaacatagtgctgtcttgatgttgaaaaatgttgtg
ttcttggtacggctgttttttctttatgtattagaattaatcaaagagatagatcgtcta
gcaaaaacaaatttggaattgcaatgtcaagcagacaaagattgttcaaacttgaataca
cagatgaaaatcttggagattgaacttgaagaccagttaaagaaaaatcaaaatctagct
gcaatggcatctgaagttattgacctaagacaacaaatggaagctcttgaaagacagctg
aaaaatcagagagatttcatggataagcaagctattgaaagggaacatgaacgtgatgag
tttcaagaagaaatttggaaactagaaatggaattaaaacttacaacaaaatctcaagct
tctggaaagtccagaaccgatctggtagaatctctccacaatgaaataaaagagagagtg
gatgattataacaggctttttacagaaaaagagcaaatagagaaactccttgcagctcgt
aatgaagaaatagaaaagttggaaggacaagtcatggagtttcaatgtctgaataaggag
gtggcaaagaatgttgataaactcatgcaggaactggaaaaaatgaaaaaaagggaaatt
gaattaaaagaagataaaggaacattgcagcagcaacataacaaacatttaattctgatt
tccactttgcaatctaaactagacgaagttagacatagagtacttattgatactaataag
gatcatatgctaaaggaacaactaaaaatgcaagaagaacttactacaaaaaaaggagag
gttgctgatttattagaacaacttggaaaatttaaagataatttaatgaataaaaatgaa
gaaatcttacagctgaaatcaaagttagaagtggaaaaaaatgctaacaacaacaaacta
atccaattgaaagaagaaaatgcacatctgaaagaaaacattgaaaaattggccatacaa
tgtcaaaatccaggtgaaaatgagctggttattctgcagttcctcaaatccttgcttgaa
gaaaaaaatcaagaaactgatcacctgaatgaacaaattgagagactggaacaaaaaata
gagagtagcaaggaaaatgaggttctcaaaaagcaaatgcttgaaaccgaagtcatgaaa
tcaaccatagaagaacttcatagtgagaaggagcatttgttaagaaataaagcagaagaa
atcgaagaacttcataaaataattaagaagcttcagaaggagtcaggagctcttataccc
atccatcatggaactaaaaataggcaaggcaacccaaattatttttctttggaagaacca
gaagagaatcttaataaatttaaggaagggtcacaaagtgttttagaaaacgaaaatggt
gatgacaactgtgtacggcttagtaccagtcagaatgaacttcagagacaactagacatg
tctttgatggataaagaaacttcgcagcagctgcttaatgaaaacgaatctcagtttaaa
atggaatttaaaatcctagaacaaaatcttgaaactcttcaggaatctcctaggcaacat
tgttctgagctaacatctttacagttgttatacaaagaactacaagaacaacacatgctt
ctgaaggtgtatgtaatgcaaaaggaagatgaaatggaagagataaattcatgtagtcag
gatcttgaagttcaccaaagagagagagaaatgaaactgttagggacagaactacaactc
caaatagagcagaatgtagagcaggcagctaaagttcagcatatgaccgaaaatattgtg
aaacttgaaaatgaacttaaaattatgacacaagcagtgcacaataatgagaccacttat
caaagaaagataaatgaacttcaagttactgttgcagaactgaaggctgaaattgagaaa
aaggtggaagaactggaattactaagatctgaaaaagatatgtttcactcacagctgaag
atccccatagaaaatgaccaagacaattaccagaaagaagttacatgccctaagaccctt
gatgttgatgtctttttaccctctgaagaaaaagagaaagggggagaagaaagagattta
agtaatatgctttcagcatctgttgatttttttattccaatggaagaagatagtgtgaat
aatctgcagatctcgagcagaaatccaaatattcacagtaaacaactgcaagacatccct
ttcattcagaggaagcaaacagactgtagtgacgtacagcaaaatctgaaacttcgtttt
aaaaatacgtgtcaatcaaatcaggattctcaaaattcacaaatctctcaaacaatacca
aattgctttcagaatataatcatgaataaaactttgtgggattctcctgagaatatgaga
aaggagaacccaaatttagagtttcaagcaagtctttccctaacacccttctcagaagtt
gatgttatgcatagtatagcctttgaaagcctatgctcggagaactcaatcatccaggaa
gacactcctagagttttagaatatccagtttcttattctaatagcaatgaggatacagca
gccaatccccacgtcttgtcttctgtgttctcagaatccacctcttctgttaacaagtgc
agtggtctacaagaaaatgtatcaataaacaacactgaaatctctctgataccacctgag
ttacaagatggtctgaaagtgacaatgtccagacttcatcatgcaagcactgaatatgga
agcaatactagtttagatttgatacttcagcttaatcaggcagagccaaaaaataaggta
tgccaaaacagcaatgtcatggctcctctgcagtgttttggaatgactccagatgtcact
gcaccaactttacaagaaacagaaatgatgtcacaacaattgaagactgtgctgaagatg
gtatatgatgagagttacaaaatgcttgttctatcagaaaaatcactacctcttgatgat
ggtgataagattcaacaaggtccatcagtggagggttggcaaagagagagactaatattg
gttgatataatacaatcactgaagaacaatctcaaacaatctaataaagagaacaaggtt
gctgatttattagaacaacttggaaaatttaaagataatttaatgaataaaaatgaagaa
atcttacagctgaaatcaaaatgtcatagttctgcattggaaaataaagagagaagtatt
acagcagcacttgagaatttacagagggaatatcttaaaaacaaagaattacagattaag
ttggatgaacagcaaaaacagcataaaataaaagaggatgaaaaatcaaaagctatagag
gagttgcaagctgccttggagttacagtgtattcagaacaatcaattaactgtggcttta
gagcatgaacagtcagcaaacagtaatctccataaagaactccaaattgaacattctcgg
tgcgaggctttattatccaaggatcagaataaactgttggaactgcagaaaaatttagat
attgagaaaaaacaaaatgcagacatgttaactgccttgaaccatgaacgtgttttgaca
gaacaactgactatgagattaaatgaatgtggatcttgtaaacataaagattcaatgcag
gaattgcaagaacaattgcatttagaaaagtccaattctatgaaacttttggctataatt
gagaaatcacagcagcagatatttgattcaaaaaaacacatggaagaaatgcatctgcat
tgtaaagactttcaacaagaacaagctctccaaaacactattcaagttacaggatcaatg
atgcaaaataaaaaacaagatgttgttcatactttggaggtacaaagagagaaagaagta
gaaacaaaaatgggatggaaacaattgcagtctgctgtcaaatcaatgagagatcaagag
atcaggacagtacaaggagaaagaaaaatggcacaggagcaacaaactgaatgtcactgt
ctaagggcacttctagaagctcaagaaaatcaaactgagtccacattacaatatttgcat
aactctgtgagattcaaggaattgcaacaaatgctagaagatctgaagaatcaagaaaaa
ctactaaaaagatataaccaatttccatcaaaaaataattacactaacttaacttttaca
actgatactgtaagattgcatgttgaacaacagatattggaaaacatcagagaacagctg
gttcttgttgctgcatatctttctgagttcatatataaaactatagacaaaacagtaaat
tggtctgcatcaaatgacaagatagttgcagccttacttcatatacttgaaatcaaagaa
ttactggcttcttccaaacctgtggttatccctacaagtataattcactctatgcaagaa
tcagaaggatttattcatcaggataagtgtgttttacagaatggtttgaaagcaacaaac
tatgcagcaaccaaaacaaatgtgccagaaaataagcaaactctgatgtctaccccaaag
atacaaaagctatatcgtaagtatttgagagctgagagttttaggaaggccctggtttat
cagaaaaaataccttcttctgcttttgggtggatttcaagaatgtgaacaagcaacattg
tccctgatagcacgcatgggcatttatccttctcctcctgatctgaatgtttctgaaaca
cgaagccatttttttaccaagttcagatctgcagttcgtgtggtcattgcgatattaaga
ttaaagtttctagtgagaaaatggcataaagtaaataagaaagaaatgccactggaagcc
atttcttctagccttggacgcaattcatatcctgtagctagtttagaagtacaaaagcag
ccacagcccttcccaagttatgctgctccagaaggtgaatactgcaacagaaataatctc
atgagacttgcaagctgcacagttaaatccttacaccatttacataacaggtctaccagt
tttacttcacaaacttcatcaaaagatactgaagattcattaactgaatacattgcacac
ttggaggcaattcaagaaagactaggaattcttctgccaggcactaactgcagtggatgt
ttgggaattggtgatgtacagagcagcattgaacctcgaagaatagatattttttgtggc
aaaaaattagcttccctcagttatggaagtggacctcatgttgttctggctactactggc
agtagcagccttgtgcgagcaacacagggagtgaaattcaaaagtgccaaacagctctca
gtcaaactcagctgtgtctcgcaacatacaaaagaggcagctggtggaacaggccatttg
acatcttctacagatcagggtcattcaagctgtgcccaagggccaagaacaccaggggtt
ctactcctggctgttcgtggtgccaaaagcctcggggggatggagacccattctggatct
caaagtcttgaaccgattcgtcatttatcgacggttcaaggtacactccttgcagtccat
cttggagagcatctgcaagggagacctctccttggtggacctcatggaggcatatctgca
tattcccatccttcgtga
DBGET
integrated database retrieval system
