Thamnophis sirtalis (common garter snake): 106543866
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Entry
106543866 CDS
T06107
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106543866 (ZC3H12C)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106543866 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
106543866
NCBI-ProteinID:
XP_013915440
UniProt:
A0A6I9XXX0
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MGLKDHLKHDLGHLYEDTSVTQISAIAPWSMIEKPTMDKINSRKEDPKKELSEETGTFSR
DSEKNIHSVNELGKATKIRTEPCSLSKDHRQTYPSLEPHILKRNEILQDIKLEEVQIGSK
EMKKPPDMVKEYQTKLDFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKTEADQ
SVSSINTSVMREASSVDSQRSDSPLQEDVLVDGDNLRPIVIDGSNVAMSHGNKEVFSCRG
IKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGR
RVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDD
PLGRHGPSLENFLRKKPVVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADELRA
MSRNTAAKAASEGGLVKSNSVPCSTKTDNTTDLKRTTPKRQSDPSIRTQVYQDLEEKLPT
KNKLGTRSVPSLVSIPSSAAAKPQSTAPLTNGLPSGVHFPPQDQRPQGPYSPVIMTTKNH
GTPMPYEQYPKCDSPVDVGYYSMLSAYSNLSISGPRSPERRFSLDTDYRISSVASDCSSE
GSMSCGSSDSYMGYNDRSYVSSPDPQLEENLKCQHMHPHSHLNSQSFLQSYHDTLTRVQS
YNHEEPKHHPKPPAPYMAVHFQHPNMGSRSTCPLDFPASQSSPHSKSMPLGRALASTRLD
SVSDSRLYDNSPLRKRKTYSAQDGLGSWDRPGYGMDTYGYRQTYSLPSNPTPPCYEQFPF
QSLPEQPDQPWQIPYCGMPQDLPRYQDSREKVYINLCNIFPPDLVRIVMKRNPHMVDAQQ
LAAAILVEKSQLGY
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaggatcacttgaagcatgaccttgggcacctctatgaggatacatcagtg
actcaaataagtgcaatagcaccttggtcaatgatagaaaaaccaactatggataaaatt
aattctagaaaggaggatcctaagaaagaactgtctgaagaaaccggaacctttagtcgg
gattctgagaaaaatatacattctgttaatgaattgggaaaagcaactaaaattagaaca
gaaccatgctccttatctaaggatcacagacagacgtatccatctttagaaccacatata
ctaaagcgcaatgaaattttacaagacattaagttagaggaagttcagataggaagtaaa
gaaatgaaaaagcctcctgatatggtgaaagaatatcaaaccaaacttgactttgcactt
aagttaggttactcagaagagcaagttcaacttgtgctgaataaacttggtactgatgct
ttaatcaatgatatattgggggaattggtcaaacttggaaataaaacggaggcagatcag
agtgtaagttctattaacacaagtgtaatgcgagaagcatcttctgttgactctcagaga
tctgactctccccttcaggaggatgtgcttgtggatggtgacaacctgagaccaatagtt
attgatggcagcaatgtggcaatgagccatggaaacaaagaagtattctcttgtcgtggg
ataaaactggccgtggactggtttttggaaagaggacacaaagatgtcactgtgtttgtt
ccagcatggagaaaagagcagtctcgaccagatgcactcattacagatcaagaaatcttg
cgtaaattggaaaaagagaaaattctggtgttcaccccatcacggcgagttcaagggaga
agggtggtatgctatgacgacagattcatagtgaagttggcttttgagtcagatggtatt
attgtatctaatgataactacagggatctagctaatgaaaagccagaatggaagaaattt
attgatgagcgactcctgatgtattcatttgtcaatgacaaattcatgcctccagacgat
cctctcggccgacatggcccaagtctggagaactttctgaggaagaaacctgttgtacca
gaacataaaaagcaaccctgtccatatgggaagaaatgcacttatggacacaaatgcaaa
tattaccacccagaaagaggaaatcaacctcagaggtcagtagctgatgaacttcgtgcc
atgtctaggaacacagctgccaaagctgctagtgaaggagggctggtgaaaagcaacagt
gttccttgtagtactaagacagataacactacagatctcaagcgaactactccaaagagg
caatcggatcctagcataaggactcaagtctaccaagacttggaagaaaagcttcccacc
aaaaataaattgggaaccaggtctgtaccttctttagttagtataccaagttctgctgct
gcaaaaccccaaagtactgcacctttaaccaatggccttccatctggagttcatttccca
cctcaggatcaaagaccacagggaccgtattctccagtgatcatgacaaccaaaaatcat
ggaacgccaatgccttatgagcagtatcccaaatgcgattctcctgtggatgtaggctat
tactctatgctcagtgcatattcaaacctaagtatctctggtccccgaagtcccgaaaga
cgtttctctttggacacagattacagaattagttctgtggcttctgattgtagcagtgaa
gggagtatgagttgcggcagtagcgattcctacatgggctacaacgatcgatcctatgtg
agttctcctgaccctcagctggaagagaatttaaaatgtcaacatatgcatccccatagc
catctgaactcacagtccttcttacagagttaccacgatacactaaccagagtgcagagt
tataatcatgaagaaccaaagcatcatccgaagcctcccgctccctacatggccgtgcac
tttcagcatccaaacatgggaagccgttctacttgtcctcttgacttccctgcttctcag
agttctccgcattcaaaaagcatgcctctggggagagctctagcatccaccagactggac
agtgtatcagactcacgcttgtatgataattctccattgagaaaaagaaaaacatactcc
gctcaagatggactcggtagttgggataggccgggctacgggatggatacatatggctat
cgtcaaacttactctttacccagcaatcccaccccaccatgttacgagcagtttcctttc
caaagcttacctgagcaacccgatcagccttggcagataccttactgtggaatgcctcaa
gatcttccaaggtaccaagacagtcgagagaaagtctacatcaacctgtgcaacattttc
ccgcctgacctggtgaggattgttatgaaaaggaatcctcacatggtagatgctcagcag
cttgctgcagccattttagtggagaagtctcagctaggttattga
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