Thamnophis sirtalis (common garter snake): 106543958
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Entry
106543958 CDS
T06107
Symbol
LRIT2
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106543958 (LRIT2)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
106543958 (LRIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
ig
LRR_4
LRR_1
Ig_2
fn3
LRR_6
LRR_9
DUF2427
LRR_14
LRR_EndoS
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
106543958
NCBI-ProteinID:
XP_013915541
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MDLKCLEHLKELKELRIQGNRLRSVPWTAFRDTPALEILDLKCNKIDVLPEHALRYLSSL
TYLDLSCNELTVISKEVFYNWLVYQKLQQLEKKAETASSTVLSLHDNPWICDCRLRGFVQ
FINSIGPPMVLINSYLVCANPKSRAGKYFHEVELNSCRRPSVTCSKPNITVFLGENSTLT
CLVKANPSPKIWWNYPLKHLRGLNVSTAHMSEESFKSELVIPSAHLLDEGNYTCTAANFL
GNASAITMLDILAPQLATSSYSSSIIDDKAYIDVHIAKQTVYGITLEWYTVSKNPEETWY
TLYFGKYDEAKKDMVYIGPGINMYSINNLLPATKYEVCIGLRKQVPPKSQCIVFVTGSDI
SELEQRGQMIHIIVVICAMVLVVPAGMYLCTSEARCSCKEKCTSCCIKKWSTNIKDVPTK
SKFDSLPGGSEEGLCRQDSSDDQTEQKEIKEKEEKPKKQKAEGQNSADLY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaaatgtcttgagcacctgaaggagctgaaggagctgagaattcaggggaac
cggttgcgttcagtaccatggacagcattccgagatacaccagctttagaaatccttgat
ctgaaatgcaacaagattgatgtcctaccagaacatgctttacgttacctttccagcttg
acctacttagacttatcttgcaatgagcttactgtcatctccaaagaagtgttctataat
tggcttgtctaccaaaaacttcagcagctagagaagaaagcagagactgcttctagtacc
gtcttgtctttgcatgataacccatggatttgtgactgccgcctgcgaggatttgtccag
ttcatcaattctataggcccacccatggtcctcataaattcctatttagtatgtgcaaat
cctaaatctagggcaggaaaatacttccatgaagtggagctgaacagctgcaggagacct
tctgtgacatgttccaaaccaaatattacggtgtttcttggagaaaattcaacattgact
tgtttggtaaaagctaatccttcgccaaaaatttggtggaactatccattaaaacactta
cgtgggcttaatgtttctactgctcacatgagtgaagagtctttcaaatcagaactggtg
attccttcagcccatcttttggatgaggggaattatacatgtacagctgccaacttcctt
ggcaacgcctcggctatcacaatgctggacattctggctcctcaactagcaacatcctct
tattcttcctccatcatagatgacaaggcctacatcgatgtgcatattgccaagcagaca
gtctatgggattactctggaatggtataccgtatctaaaaatccagaggaaacctggtat
accctctattttggcaaatacgatgaggctaagaaagacatggtttacattgggcctggg
atcaacatgtactccattaataatttgctccctgctaccaagtacgaagtgtgcataggt
ctgaggaagcaggtgcccccaaagagccagtgtattgtgtttgtgacaggaagtgatatc
agtgaattggaacagagagggcagatgatccatatcattgttgttatatgtgccatggtg
ttggtggtccctgctgggatgtacctatgcacctcggaggccaggtgcagctgcaaagag
aaatgcaccagctgctgtatcaagaaatggagcacaaacatcaaagatgtgcctacaaag
agcaaatttgatagtttgccaggaggcagtgaagaaggactgtgtcgccaagactccagt
gatgaccagacagaacagaaggaaatcaaggagaaggaggagaaaccaaagaagcagaag
gcagagggtcaaaacagtgctgatctctattag
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