Thamnophis sirtalis (common garter snake): 106543960
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Entry
106543960 CDS
T06107
Symbol
CDHR1
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106543960 (CDHR1)
Cell adhesion molecules [BR:
tsr04515
]
Cadherins
Cadherin related
106543960 (CDHR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
RibLong
Motif
Other DBs
NCBI-GeneID:
106543960
NCBI-ProteinID:
XP_013915544
UniProt:
A0A6I9XIF0
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MKRKRHLPTSLFLNLVHVCLVQANYAPYFFDNGASSNNGNMALFSLSEDTAVGTHVYTLN
GTDPEGDPVTYGITFDAGARKYFSVDENFGNVTLIAELDRETQDEIEVVVNISDGLSTVA
EKVRIVITDANDERPEFINTPYIVQVQENMPVGSSIFKIEAVDRDTGSGGSINYFLQNIH
TNKFTIDRHSGVLRIKTGTSLDYEKARTFFVTAVAKDGGGKLRGNHKVFSATTTITINVE
DIQDTPPIFVGTPYYGYVYEDTLVGSEVITVVAIDGDRGIPNDIYYSIMNGSEGSFEINN
ATGAISVVKNPTKLKKEVYELKVQASEIGSEDNETAHASTTVIIRMVDLNNHPPTFYGES
GPQNQFELTIYEHPLEGETLRGLKIMVNDSDQGANAKFNLHLVGLGGIFRVVPQTVLNEA
QVTIIVENSAAIDYEKFQELTFKLLAVEVDTPEKFSSTADIVIHLLDTNDNIPQFSSDYY
IAKIPENSPGGSNVVAVTAIDPDSGLWGELKYSIYGTGADLFLIHPSTGIIYTQPWANLD
AEISSKYHFFVKAEDIEGKHSLAEVFITVLDVNDHSPEFSENIQEKTMIIGSPVKVEAID
QDAEEPNNIVDYAIMQTDPADVFDIDQSSGEIKLKSYIRSLDVIHNITKNKDCIWSVIIQ
AKDRGSPSFSTTAVLKLGIREETLHTGPMAAFLMKTKDNPMKAIGVLAGLIGIMVMVILF
ISTAMFWRNKRSPRIMPARRIIKKRPNYQPRTFRMQWLSFKKSSSHAAEKFTVNEDNISL
QNENSNNSSQIPSLPPPPPSVPIPSQASLFKIQEPTWKLSTVSGSLSPKFVNKQARKKGA
LHAADTALVSELKQRLEMRNSVVSQPHI
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaaaacgacatttgccaacctcgttgtttctcaatctggtgcacgtttgcctg
gttcaagcaaattatgcaccctatttctttgacaatggagccagcagcaataatgggaat
atggccctcttcagcctctcggaagatacagctgtgggcacgcatgtttatacactaaat
ggaacagatccggaaggagatccggtaacctatggcattacctttgatgccggagcaaga
aaatacttctccgtggatgaaaactttggaaatgttaccctgattgcagagcttgatcgg
gagacacaagacgagatcgaagtggttgttaatatttctgatggattaagcacagtggcg
gaaaaggtcagaatcgttataacagacgcaaatgacgagagaccagaattcatcaacacg
ccttacatcgttcaagtccaagagaacatgccggttgggagcagcatcttcaaaatcgaa
gcagtggacagagacacaggctcaggaggcagcattaactatttcctgcagaatatccat
acaaataaatttaccatagatcgtcacagcggtgtccttcgcatcaaaacagggaccagc
ctcgactacgaaaaagcaagaacttttttcgtgactgcagtggctaaggatggtggggga
aagcttcgtggaaatcacaaggtattttcagccacaactaccatcacaatcaatgttgag
gatattcaagacacgccaccaatttttgtgggcacaccctactatgggtatgtgtatgag
gacacactggtgggatcggaagttataactgttgttgccattgacggagacaggggaata
cctaatgacatatattacagcattatgaatggaagtgaaggttcatttgaaataaataat
gcaacgggagctatttctgttgttaaaaacccaactaaactgaagaaagaagtatatgaa
ctgaaggtccaggcttccgaaattggttcagaagacaacgaaactgctcatgcatccacc
acggtcatcatcagaatggtagaccttaacaatcacccaccaaccttctatggagaaagt
gggccacagaaccaatttgagctgaccatctatgagcacccactggaaggtgaaaccttg
aggggcctcaaaattatggtcaatgattcagatcagggagcaaatgctaaatttaacctc
caccttgttgggctcggaggaattttccgtgttgtccctcagacagttctaaatgaagcc
caagtcacaataatagtggaaaattctgctgccatcgattacgaaaagttccaagagtta
accttcaagcttcttgcagtagaagtggacacacctgagaaatttagttcaacggccgat
attgtgatccatctcttggacacaaatgataacatcccccaattttcatctgattactac
atcgccaagatcccagagaattctcccgggggttccaatgtagttgctgtaactgcaatt
gatccagattcaggcctctggggtgaattaaaatactcaatttatggaacaggagcagat
ctctttctgattcatccctctactgggattatctacactcagccgtgggccaacctagat
gcagaaatcagctccaagtaccattttttcgtgaaggcagaagatatagaaggaaagcat
agtttggccgaagtcttcatcactgtccttgatgtcaatgatcattctccggagttcagt
gagaacattcaggaaaaaaccatgattattggatccccagtaaaagttgaggcaatagat
caagatgcagaagaacccaataacattgtggactacgccattatgcagactgatccggcc
gatgtgtttgatattgatcaaagctctggagaaattaaattgaaatcttacatacgatcc
ttggacgtcattcacaacatcaccaagaacaaagattgcatttggtcagtgatcatccaa
gcgaaggatcgagggtctccatcgtttagcaccacagctgttctgaaacttggcatcaga
gaagagactcttcacacaggaccaatggctgcctttctgatgaagaccaaagacaaccca
atgaaggccataggagtcctggcaggcctgattgggatcatggtgatggtcatccttttc
atctccactgccatgttctggcgcaataaaaggtcccccaggatcatgccagcacgacgg
atcatcaaaaagaggccgaattatcaacctcgtacctttaggatgcagtggttgagcttc
aagaagtcctctagccatgcggcagagaaatttacagtcaatgaagacaacatcagcttg
cagaatgagaacagcaataacagttcccagattccgtctctgccgccaccaccaccctcc
gtgccaatcccatcgcaagcctctctcttcaagatccaggaacccacctggaaattgtcc
acagtttcaggatccctgagccctaagttcgtaaataagcaggcaaggaaaaagggagct
ctccacgcagccgacacagctctggtatctgagctcaagcagagattggagatgagaaat
tcagtggtcagccagcctcacatttaa
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