Thamnophis sirtalis (common garter snake): 106543962
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Entry
106543962 CDS
T06107
Symbol
YTHDF3
Name
(RefSeq) YTH domain-containing family protein 3 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106543962 (YTHDF3)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106543962 (YTHDF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
TFIIA
Motif
Other DBs
NCBI-GeneID:
106543962
NCBI-ProteinID:
XP_013915545
UniProt:
A0A6I9Y7P7
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MSATSVDQVPPSRGFVVPEWRIPSSRLPSVGHSGDPSPLHPRLWDSSPAPRTAPSAGLEA
AGPGAFLPRLNDSICLCSREGNLFASLLKSTTSGPFLARAGPWPSLTVVGRGSEEFARPK
GQGNKVSVQNGSIHQKDAVNDDDFEPYLSSQTNQSNSYPPMSDPYMPSYYAPSIGFPYSL
GEAAWSTAGDPPMPYLTTYGQMSNGEHHYIPDGVFSQPGALGNTPPFLGQHGFNFFPGNA
DFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGRAIADGQAGFGNDTLSKVPGISSIEQGM
TGLKIGGEMTVAVTKTVGSALTSTGMTSIAANNVPAVSSSAPKPTSWAAIARKPAKPQPK
LKPKGNVGIGGPTVPPPPIKHNMNIGTWDDKGSVVKAPPIQPVLPPQTIIQQPQPLIHPP
PMVQSQLPPPQQQQQPPPQSQQPQGPQQQAQPHQLQQQQQLQNRWVAPRNRGVGFNQSNG
AGNENYGIGVIPVSSSPSGVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFIIKSYSEDDI
HRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYA
GVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKI
IATFKHTTSIFDDFAHYEKRQEEEEAMRRMIPAFPDFGRLQGKEVVLPSNYEVNLAISTS
FYQLRQPLLN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaccagcgtcgaccaggtaccgccttctcgcggcttcgtggttcccgagtgg
aggatcccctcgtcccgccttccttccgttggtcatagcggggatccgagcccgctacat
ccgagactgtgggactcctcccctgctcccaggaccgccccttctgcaggcctggaggcc
gctgggcctggggccttcctgccgaggctcaacgattccatttgcttgtgttcacgggag
ggcaatttattcgctagtctcttaaaatccacgacctccggccctttccttgctcgggct
ggtccctggccctctctgactgtggttggacgtggctctgaggaattcgcaagacctaaa
ggacagggaaataaagtttcagtgcaaaacggttcgattcatcaaaaggatgcagtaaat
gatgatgattttgagccatatctgagtagccagacaaatcagagtaatagctatccacca
atgtcagacccatacatgcctagttattatgctccctccattggttttccatactctctg
ggtgaagcagcatggtccacagctggagatcctccaatgccatacttgacaacttatgga
cagatgagcaatggtgaacaccactatattcccgatggtgtattcagtcaacctggggct
ttagggaatactcctccgtttcttggtcagcatggatttaatttttttcctggaaatgca
gatttctctacatgggggacaagtggatctcaggggcaatcaacccaaagctctgcttat
agcagcagctatggctacccacccagctctctcggtagagctatagccgatggacaggct
ggatttggcaatgatactttgagcaaggtacctggaattagcagcattgaacaaggtatg
actggattgaaaattggtggtgaaatgacagttgctgtaacaaaaacagttggatcagct
ctaaccagtacaggtatgaccagcattgcagcaaataatgtgcctgcagttagcagttca
gcacctaaaccaacctcgtgggctgccattgcaagaaagcctgctaagcctcagccaaaa
cttaaacctaaaggtaatgtgggaattgggggccctacagtaccgccaccacctataaaa
cacaacatgaatattggcacttgggatgacaaagggtcggtggtaaaagctcctccaatc
caaccagtactgcctcctcagactataattcaacagcctcagcctttaattcatccacct
cctatggtgcaaagccagctgccgccgccgcagcagcaacagcagccgccaccacagtca
caacagcctcaaggacctcagcaacaggctcagcctcatcagctgcagcagcagcaacag
ctgcaaaatcgctgggtggctcctcgcaatagaggtgtaggcttcaatcagagcaatgga
gctggcaatgaaaactatggtataggtgttataccagttagctcttcaccatctggtgta
gaagtacacccagttttggaaaaattaaaggccataaataactataatcccaaagacttt
gactggaacctgaagaatggtcgtgtgtttataatcaaaagctattcagaggatgatata
catcgttccattaaatattctatctggtgtagtactgaacatggtaataagcgcttggat
gctgcatatcgttcactgaatggaaaaggcccactctatttacttttcagtgtgaatggc
agtggacacttctgtggagtagctgagatgaagtcggtggtggactacaatgcgtatgct
ggagtgtggtctcaggataaatggaaggggaagtttgatgttaagtggatctttgttaaa
gacgttccgaacaaccagctgcggcacattcgcttggaaaataatgacaacaaaccagtt
accaattcaagggacactcaagaagtacccctagaaaaagccaagcaagtgcttaaaata
attgctactttcaagcataccacctcaatctttgatgactttgcacattatgaaaagcgt
caagaggaggaggaagccatgcgtaggatgatccctgcatttccagattttgggaggcta
caggggaaggaggttgttttgccttccaactatgaggtcaatttggccatctcaacaagt
ttttatcaacttcgccaaccactcctcaactga
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