Thamnophis sirtalis (common garter snake): 106544088
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Entry
106544088 CDS
T06107
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106544088 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106544088 (TAF4B)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106544088 (TAF4B)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106544088 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
106544088 (TAF4B)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106544088 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
DUF5917
Motif
Other DBs
NCBI-GeneID:
106544088
NCBI-ProteinID:
XP_013915716
UniProt:
A0A6I9XPE2
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MTTPAPAAAAAVLGRDMAPGPPEHAALAADPPVNAASGKQEPRAVVPARRTVPSPSCPAI
PTGSPVRFVLNPVGARLPLSFVPSFAPQPRVLPAPIGIKLAPSTPGRQLSKSSNMGVRQP
VPPSGGPKSAQMTIQLPANFQIPQGMILVRSNTGQLMLISQQALLEAQSQTSNNTSVKCS
IPPTATTIKIQPEQSSGTQVLKVLTAPVKTLAWATHSITSTVKKPAVIQSIASPNIIGST
AKSLIAGSSAKLPLSDSPMMAFTSKPVAETDDSKVTQPFSYTEMLENVKKCKNFLTTLIK
LASSGPQAPQMGQNVKHLVQRLLEAKIEPEEFTKELYVELKSSPQPNLVPFLKKSILSLR
QLMPNTETFIEQCLQQSAPQTASSTYSTASSTSSTVADGTLASSQPATSVPSSPLQISSP
RTSILVPCTTTRSDSVSLPLVEAACALAAGALSYQDDKSILSTQLIGGINTMKAIQTTST
TEETGTVSLQVAKPDPTLPSTTFTTSSMKSAASAGMSSFEVAKLPLATTATSATSVTTTL
QSVLPITGAPSAVRVPHPNSALPQPIWSSLAGKVKQSAVQQPSGNILRNVAKHQQVPTLP
NVNKLCEKRPLNAFIQGSIVKQITLAGNKFLSLEASPVQRNKIRESGTTSFREEDDINDV
ASMAGVNLSEEHACILTTNSEAIGTVLCSCSEKLLLSSEALQKRILKKGKRHDIMEVNSD
VLNLISYATQERLIGLLEKLTLIAQHRIRTYKGNNKYILSNDTRSQLQFLEQLDQVEKRR
KDEEEKEQLLRAAKSRCNKEDTEQLRLKQKAKEMQQLEFTQMQQQEANRAALEALGPRKK
RPLDSSISFSGLEGFNRMPSLTTRYLWPRITRI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgactactcctgcgccggcggcggcggcagccgtcctggggagggacatggcccctggg
cctcccgaacatgctgctttggccgccgatccccctgtgaacgcggctagcgggaagcag
gaaccccgggcagtggtgcccgctcggagaacggtcccctctccctcctgtccggcgatt
cccacgggcagccctgttaggtttgtcctgaatcccgtgggcgccaggcttccccttagc
ttcgtcccatccttcgctcctcaaccccgagtgctgcctgcccccataggaatcaaacta
gccccctcgactcctgggcggcagctctccaagtcaagcaacatgggtgtgaggcagcca
gtccctccctcgggaggacccaaatccgcacaaatgacaatacaattgcctgctaatttt
cagatcccccaaggaatgattctagtcagaagtaataccggtcaattaatgttgatatca
caacaagcattattagaagctcagagtcagacctcaaataataccagtgtaaaatgctca
atacctccaactgcaactaccatcaaaattcagcctgaacagagttctggaactcaggta
cttaaagtactaacggctcctgttaaaacactggcttgggcaactcattctattacttct
actgttaagaagcctgctgtaattcagtctatagcatcaccaaatattataggctcaaca
gcaaagtcattgattgctggatcatcagcaaagcttcctctttctgactctcccatgatg
gctttcacttcaaaaccagttgctgaaacagatgactccaaagtcacccagcccttcagt
tatacagaaatgctggaaaacgtgaaaaagtgcaaaaacttccttacaacactaataaaa
ctggcctccagtggacctcaagcacctcagatggggcagaatgtgaagcatctggttcaa
aggctgttggaagctaaaattgagccagaagaatttaccaaagaactatatgtggaacta
aagtcttctccgcagccaaatcttgttccctttctcaagaaaagtatactctccttacgg
caattaatgcctaatacagagacctttatagaacaatgtcttcagcaatctgcccctcaa
acagcttcttctacttattccactgcatcatcaacttcttccacagttgctgatggcact
ttggcctcctctcaacctgcaacatcagtccccagctctccacttcaaatatcttctcca
cggacatccattttggtaccctgcacgactacaagaagtgattctgtgtctcttccactt
gttgaggcagcttgtgctttggctgcaggagcactctcttaccaagatgacaagtccatc
ctctccactcaactgattggaggaatcaataccatgaaggccatacagacaacttccact
acagaggagacgggaacagtttctcttcaggtagcaaagccagacccaacattaccttca
actacttttactactagttctatgaagtcagccgcatcagctgggatgtcgtcatttgaa
gtggcaaaactgcccttggctactacagcaacctctgctacatcagtaaccacaactctc
caatctgtcctgcctatcactggggcgccaagcgctgtacgggttccccatcccaattct
gcccttccccagccaatttggagttctctggctggaaaggtaaaacagtcggcagtccag
caaccctctggaaacatcttaagaaatgtggccaagcatcagcaggttcctactctccct
aatgtgaacaagttatgtgaaaaaagaccattgaacgcttttatccaaggctccattgtg
aaacaaattaccttggcaggaaacaaatttctatcgcttgaagcgtctcctgttcagaga
aataaaataagagagagtggaacaacatccttcagggaagaagatgacattaatgatgtg
gcttctatggctggagttaacttgagtgaagagcacgcatgcatattgaccacaaattct
gaagcaatcggtactgttttgtgctcttgttcagagaagctgctcctctcttcagaggca
ttgcagaagaggatcttaaaaaaaggtaaaaggcatgacattatggaagttaattctgat
gttctgaacttgatctcctatgctacccaggagagattaataggacttctagaaaaacta
actttaattgctcaacatcgtataaggacctataaggggaataacaagtacattttatct
aatgatacgcggtctcagcttcagtttcttgaacaattggatcaggttgagaaacggagg
aaagatgaagaagaaaaagaacagttgctccgagcagccaagagccgttgcaataaagaa
gatacagaacagctgcgtttaaagcagaaagcaaaagagatgcaacaattagaattcaca
caaatgcagcaacaggaggctaatcgtgcagctctggaagcccttgggccaagaaagaag
agaccattggattcgtctatttctttttctggacttgagggcttcaacagaatgcctagt
cttacgacacgatacctttggccaagaataacccgaatt
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