Thamnophis sirtalis (common garter snake): 106544138
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Entry
106544138 CDS
T06107
Symbol
RFFL
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106544138 (RFFL)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
106544138 (RFFL)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
106544138 (RFFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
ARMET_C
FYVE_2
GAGBD
Motif
Other DBs
NCBI-GeneID:
106544138
NCBI-ProteinID:
XP_013915787
UniProt:
A0A6I9XP80
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MPWLSRFLLSKVFFKPRKPASFLLLTDFLFEKFTAIMWAACCNWFCLNGQPEDMPHCPQP
GTRAYSNAGYSSFPSPTASEQSCKACGVHFSSSFLKRVCLDCKKSFCPSCSHQPESSPCL
CHLCERFRATAFQREELIKMKVKDLRDYLELREISTEMCREKDELVCLIISQQPLDPQRE
RAPQVPCPAPVSVAQEECTVTPVSQDYSPEQISTNPALQTEEHPQANGHVLPSQDDMAEV
ESAVQNLPEEETQSTDSEDNLVTGRRASLSDLTSLRDIDALSVRQLKEILARNFVNYKGC
CEKWELMERVTRLYKEKDLQQLVSDTDDQTGKHLLLCLLNIVSCNYLNRNTYCLPGKLVV
LNQCNLVSLFEPIKCMYALVFGLLKHTHTHTHTHTHSHM
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgccttggttgtctagattcttgctttctaaggtcttcttcaagccaagaaaaccagcc
tctttccttctgttgactgactttttgtttgaaaaattcacagctatcatgtgggctgca
tgttgcaactggttttgcctgaatggacagcctgaagacatgccacattgcccgcagcca
ggaactcgagcatactccaatgctggctacagctccttcccatctcccacagcttcagag
cagagttgcaaagcctgcggggtgcattttagcagctccttccttaagcgcgtctgcctg
gactgcaagaaaagcttctgcccttcctgttcgcaccagcccgagagcagcccctgcctc
tgccacctctgtgagcgattccgagctacagcttttcagcgggaagaactcatcaaaatg
aaagtgaaggacttgcgagattatctggagctccgggagatctccacggagatgtgccgt
gaaaaagacgagctggtgtgcttgattatcagtcagcagcccttggatccccaaagggag
agggccccccaggttccttgcccagcaccagtttctgttgcccaggaggaatgtacagtg
acaccagtttcacaggattactctcccgagcaaatttccaccaaccctgccttgcagact
gaggagcatccccaggcaaatgggcatgtgctgccgagccaggacgatatggcagaagtt
gagagcgcagtgcaaaacctgcctgaggaagagacgcagtccactgattcagaagataac
ctagttacgggacggagggcatctctctctgacctaacaagcctgagagatattgatgcc
ctctcggtaaggcagttgaaagagatcctggctcgcaacttcgttaactacaaaggctgt
tgtgagaaatgggagctaatggagagagtgacccgcctttacaaagagaaggacctccag
cagctggtttcagatactgacgatcaaactggtaagcatcttcttctttgtcttctcaac
attgtaagctgcaactatttaaacaggaacacttattgtcttccaggaaaattggtagtc
ttaaatcaatgtaatttggtttctttatttgagccaataaaatgcatgtatgctttagtg
tttgggctactaaaacacacacacacacacacacacacacacacacacagtcatatgtaa
DBGET
integrated database retrieval system
