Thamnophis sirtalis (common garter snake): 106544160
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Entry
106544160 CDS
T06107
Symbol
RNF180
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106544160 (RNF180)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106544160 (RNF180)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106544160 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-RING_5
RING_XB3-XBAT31
COX16
Motif
Other DBs
NCBI-GeneID:
106544160
NCBI-ProteinID:
XP_013915819
UniProt:
A0A6I9XJ77
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MAHEHTSFSRLGELHNRKGNWTTGKLNFPFCEACLGEYNFISNTVCLCGQFTDIHLCKRQ
TGCQIATRLPKSELKYLSLCKCNCDSSKEIHKSATSGILRAGNQRVPYLAKSNDSTGRLM
EALCLELRSANFEMNNKKLCFKVSNLKASISASLAQNDGYTVKAFHRIPQSLRKRLVLLP
TLYGISTIERPVFSRQHETQHFNSKDCLPLKSNKVHNYFQFQLESDTSELSKNFLVTSYR
ILAQEETGFNLFGKLQKVILRVLLLINSCSYLHQTILQKKNTLQLHIIPFYLLQPFTTID
QELYKKKRNQLNNLGRKHRWQDQTMNTKEEYEHRKDKESYLCAVCLDIYFNPYMCYPCHH
IFCEPCLRMLAKDNPTSTPCPLCRTAITHVFFQSDLNNSTETFFPMEYSKLKENFQKSNL
ANWPLPSCKKVFRVIDGFQSTDSFTRRHFPHAAHRMDYMDFEDDSRGWRFDMDMVIIYIY
AINWVLGFIVFCFLCYFFFPF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgaacatacaagcttttccagattgggtgaattgcataatagaaaaggcaac
tggacaactggaaaattgaacttcccattctgtgaggcttgccttggagaatataatttt
atcagtaatacagtatgtttatgtggacagttcacagatatacatctttgtaaaagacaa
actggctgccaaatagctactaggttaccaaaatcagaactaaagtacttgtcactttgt
aaatgcaattgtgattctagtaaagaaatacacaagagtgctacaagtggaattctgaga
gctggaaatcaaagagttccatatctggctaaaagtaatgacagtactggaagattaatg
gaggcactttgcctagagttgagatcagctaactttgagatgaataataaaaaactatgc
ttcaaagtgtctaatctaaaagcaagtatttcagcttcactggctcagaatgacggatac
actgtaaaagcttttcatagaataccacagagtttgagaaagaggcttgtcttgcttcct
actttatatggaatatccacaattgagagacctgttttttctaggcaacatgagacacag
cattttaattcaaaagattgcttaccactgaaatccaacaaagtacataattattttcag
ttccaacttgaatcagatacttctgagctttcaaagaattttttagttacttcttacagg
atattagcacaagaagaaactgggtttaatctgtttggaaagcttcaaaaagttatcttg
agagtgctgttactgatcaacagctgttcttaccttcatcagacaatattgcaaaagaaa
aatactctccagctgcatatcatacctttttatcttcttcagcccttcacaactattgat
caagagttgtacaagaaaaaaagaaaccagttgaacaatttggggagaaaacataggtgg
caagaccagacaatgaatacaaaagaagaatatgaacacagaaaagataaggaaagctac
ctctgtgcagtttgcttggatatctacttcaatccttacatgtgctacccatgccatcat
attttctgtgaaccttgcctacgtatgcttgccaaggataatccaactagcactccatgt
cctctctgccgtactgcaattacccacgtttttttccaatcagacctgaacaattccaca
gaaactttctttccaatggaatattcaaaattaaaggaaaattttcaaaaatcaaattta
gcaaattggcctctccctagttgcaaaaaagtattcagagttattgatggttttcagagt
acagactccttcacacgaaggcattttccacatgctgctcacagaatggattatatggac
tttgaggacgatagccgtggatggcgatttgacatggacatggtgatcatctacatttat
gccatcaactgggtcttgggatttatcgtgttttgttttctttgctattttttctttcct
ttttaa
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integrated database retrieval system
