Thamnophis sirtalis (common garter snake): 106544212
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Entry
106544212 CDS
T06107
Symbol
DKC1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4 isoform X1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106544212 (DKC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106544212 (DKC1)
03032 DNA replication proteins [BR:
tsr03032
]
106544212 (DKC1)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
106544212 (DKC1)
Prokaryotic type
106544212 (DKC1)
DNA replication proteins [BR:
tsr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
106544212 (DKC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
Motif
Other DBs
NCBI-GeneID:
106544212
NCBI-ProteinID:
XP_013915895
UniProt:
A0A6I9Y7W7
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MADGTDSVPKKHKKKKKSLPDEDVADIQHTEEFLIKPESRVAQLDTSQWPLLLKNFDKLN
VRTAHYTPLPSGCNPLKREIAEYVRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGT
LDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIESEMQLSRAIETLTGALFQR
PPLIAAVKRQLRVRTIYESKLVEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQM
QELRRVRSGVMGEKDHMVTMHDVLDAQWQYDNNKDETYLRRVIFPLEKLLVSHKRLVMKD
SAVNAICYGAKIMLPGLLRYDDGIEVNQEIVVITTKGEAICIAIALMTTAVISTCDHGVV
AKIKRVIMERDTYPRKWGLGPKASQKKMMIKQGLLDAHGKPNEKTPQTWKKDYIDYNRVS
VKKETEEKTEPEEIQEQPERMPKKKRKIESDGDPEPVASAPPASPEEEQAEMKKKKKKKK
EKRKMESAESSGELVEMVSDLSVKKKKKKKKREEIEESSE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgggacagattcagttcctaagaaacataagaagaaaaagaagtctttgccg
gatgaagatgttgcagatatacaacatacagaagaattccttatcaaacctgagtcaaga
gtggcccagctggatacatcacaatggcctttgcttctcaaaaattttgacaagttaaat
gtgaggacagcgcactacaccccacttccttctggctgcaatcccttaaaaagagaaatt
gctgagtatgtaaggacgggcttcatcaacctggataagccttccaacccttcctcccat
gaggttgtggcctggatccgccgcattctccgtgttgagaagacaggccatagcggcaca
ttggatcccaaagttaccggctgcctgattgtgtgcattgagcgagcaacccgtttggtc
aagtctcagcaaagcgcaggcaaagagtatgtgggaatcgttcggctgcacaatgcaatt
gagagtgaaatgcaactttcgagggcaatagaaaccttgacaggtgccctctttcagaga
cctcccctcattgctgccgtgaagaggcagctgagagtcagaaccatttatgaaagcaaa
ctggttgaatatgatccagaaagaagactgggtattttctgggtgagctgtgaagccgga
acctacatccggacgctttgcgtgcatctgggtttattgctgggagttggcggtcaaatg
caggagctccggagagtccgctccggggtcatgggagagaaggaccatatggtgaccatg
cacgatgtgttggatgctcagtggcagtacgacaacaataaggatgagacttatctccgg
agggtgatcttccctttggagaagttgttggtttcacacaagcgacttgttatgaaggac
agcgcggtgaatgcgatttgctacggtgcaaagatcatgcttcctggattactgcggtat
gacgatgggattgaagtcaaccaggaaatagtcgtcatcaccacaaaaggggaggcgatc
tgcatagctattgctttgatgaccacggcagtgatctctacctgcgaccacggcgttgta
gccaagatcaagcgtgtgatcatggaaagagacacttatcctcgcaagtgggggcttggt
cccaaagcttctcagaagaagatgatgatcaagcaaggattgttggatgctcatggtaaa
cctaacgaaaaaactccacaaacgtggaaaaaagactacatagattataacagggtttct
gtaaagaaagagacagaagagaagacggagccagaagagattcaagagcagccagagagg
atgccaaagaagaaaagaaaaatcgagagcgatggagatccagaaccagtagcttcagct
cctccggcctctccggaggaggagcaagcagagatgaagaagaagaagaagaaaaagaag
gaaaagaggaagatggagtctgcggagagcagcggagagttagttgaaatggtcagtgat
ctgagtgtgaaaaagaagaagaagaagaagaaacgagaagaaatagaggagagttcagaa
tga
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