Thamnophis sirtalis (common garter snake): 106544234
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Entry
106544234 CDS
T06107
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106544234 (DDX55)
Enzymes [BR:
tsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106544234 (DDX55)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Pre-60S particles
Helicases
106544234 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
CTE_SPB4
Helicase_C_2
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
106544234
NCBI-ProteinID:
XP_013915931
UniProt:
A0A6I9XQ54
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MLLLLLYFFFSSQCLLIGGKNPMEDVERFKERGGNILVATPGRLEDMFRRKSEGLDLAKA
VKSLDILVLDEADRLLDMGFEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPV
RISVKEKGMAASNTQKTPTRLQNYYMICKADEKFNQLVHFLRQHKPEKHLLFFSTCACVE
YYGKALESLIKNVKIMCIHGKMKHKRNRIFTEFRKLPSGILVCTDVMARGIDIPEVNWVL
QYDPPSSASAFVHRCGRTARIGHLGSALVFLLPMEEAYISFLAINQKCPMEELNPQRNVV
DVLPKLKSLNLADRAVYEKGMKAFVSCVQAYAKHECNLIFRIKGELAWLENGSDVDNEDM
EELLNDTRLLKKLKRGKISEKEFEKTLLGGGKGGSGSDSEG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgctgcttctttatttttttttctccagccagtgccttttaattggcgggaaa
aatccgatggaagatgtagaaagattcaaggaacgcggtggaaacattctggtggctacc
ccaggtcgcttggaggacatgttcaggaggaaatcggagggcctggatttggccaaggct
gtaaaatctctggatattttggtcttggatgaagcagatcggctgctggacatggggttc
gaagcaagtttgaacacgatcctggattttctgccgaagcagagacggacgggcctcttc
tccgcaacgcagacgcaggaggtggagaatttagtgagagcaggactccgcaaccccgtc
cgtatctcggtgaaggagaaagggatggcggccagtaacacccagaagacgcccactcgg
ctgcagaactattacatgatctgcaaggccgacgagaaatttaaccagctggttcacttc
ctgcgtcaacacaaaccggaaaagcatcttctctttttcagtacctgtgcttgtgtggaa
tattacgggaaagctttggagtctttgattaagaacgtgaaaatcatgtgcatccatgga
aagatgaaacacaaaaggaacaggatctttacagagttccggaaacttccaagcggcatc
ctggtgtgtaccgacgtgatggcccgtggcatagacatcccggaggtgaactgggttttg
cagtacgaccccccaagcagtgcaagcgcctttgtgcatcgctgtggccgcaccgcccgc
atcggccacctgggcagcgcgctcgtcttcttacttcctatggaagaagcttacatcagt
ttcctggccattaaccaaaagtgccccatggaggaactgaatccgcagaggaacgtcgtc
gacgtccttccgaagctgaagtcgctgaatctggccgaccgagccgtgtacgaaaaaggg
atgaaggcctttgtctcttgcgtccaagcctacgccaagcacgaatgcaacctgatcttc
cggatcaaaggtgagctggcttggctggaaaacggttctgacgttgacaacgaggatatg
gaggagcttctgaacgatacccggcttttgaaaaagctcaaaagaggtaaaatcagcgag
aaggagtttgagaagacgctgctgggcggtgggaaaggaggaagcggctcggattccgaa
ggataa
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integrated database retrieval system
