Thamnophis sirtalis (common garter snake): 106544267
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Entry
106544267 CDS
T06107
Symbol
ITGA1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04810
Regulation of actin cytoskeleton
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106544267 (ITGA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106544267 (ITGA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106544267 (ITGA1)
04810 Regulation of actin cytoskeleton
106544267 (ITGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106544267 (ITGA1)
04515 Cell adhesion molecules [BR:
tsr04515
]
106544267 (ITGA1)
04090 CD molecules [BR:
tsr04090
]
106544267 (ITGA1)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106544267 (ITGA1)
Cell adhesion molecules [BR:
tsr04515
]
Integrins
Integrin alpha subunits
106544267 (ITGA1)
CD molecules [BR:
tsr04090
]
Proteins
106544267 (ITGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
VWA_2
Integrin_A_Ig_1
FG-GAP_3
FG-GAP_2
EIF3I
vWA_SIBA-E
LYRIC
Motif
Other DBs
NCBI-GeneID:
106544267
NCBI-ProteinID:
XP_013915978
UniProt:
A0A6I9XZE4
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MGFGSLTAICSITHVFFPCVGITVLLHLSLSSNVDVKDTMTFSGPVEDMFGYSVQQFENE
EGKWVLIGSPLAGQPQKKTGDVYKCPVGQGNGLPCVKLNLPADTSIPQVTEVKENMTLGS
TLVTNPKGGFLACGPLYAYKCGHSYYTTGICSNVSSNFEVVNSIAPLRECKSRLDIVFVL
DGSNSIFEWKDVTNFLKRILQNMSIGPHDTQVGIVQYGENVTHEFYLNAYSTTEEVLEAA
GKIKQREGFETMTALGIETARNEAFTKAHGARPGVQKVMVVVTDGESHDNYRLQKVIDDC
EKDNIQRFSIAILGSYNRGNRNPEKLVEEIKSIASKPTEKHFFNVSNEVALLTIVEALGE
RIFALEATNDQQAASFEMEMSQVGFSAHYSQDWIMLGAVGAYDWNGTVVMLKDKNFLTPA
SNAFDDSFSERNESLAAYLGYAVNSASVPGDLLYIAGQPRYNHTGQVIIYRMKDTEIEIL
QKLSGEQIGSYYGSVITTIDIDKDTYTDLLLVGAPMYMGTEKEEQGKVYIYSLNKKTFEY
QMTLEPIKQTCCLVHKEKDCTNHNKNEPCGARFGTSIAPVKDLNLDGFNDIVIGAPLEDD
HRGAVYVYHGNGKSIKKEYAQRIASGGDGEKMKFFGQSIHGEMDLNGDGLTDVTIGGLGG
AALFWSRDVAQVNASMKFMPNKIDIQKLSSDMQKQKVYINSTICFQVRLKSKDTTINETD
IQYWLTLDSQRKVSRTLFAETNERRIQKNITVRGSECIKHNFYMLGKPDFRDPIKVLLEF
NFSDPESGPILDSELPNSVAEYIHFTKDCGNKNKCITDLQLTANATIGGSSLSPFIIKQN
NLKFWVQMLVRNKKDSAYNTRVYVQHSPNIIFSGLEKIPKDSCDTGQNITCKVGYPFLSP
KEEIYFEIAVQFNVSHLLENTTIHFSVTRRESSPHHIIIAANDTIPAVINSTDNIGEEIN
INYLIEKGEHFLQPQLALQISFPKNISVENQILYFTRISYSENAKCQSSHPSDLLKIDMG
KPFKTSKIQEPLKDPNINCDGYDCASINCTIAPSNITHVNISFRLWKPTFITAKIHSIEL
IVKASLRSENSLMILKKENEKIETIIQISKELLPGHVPLWVILLSVFAGLLILTLLIFAL
WKAGFFNRPLRKKMEK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgggatttggctccctcactgccatctgcagcatcacacatgtcttcttcccttgtgtg
ggaataacagttctgctgcatctttctttgtcatccaacgttgatgtgaaagatacgatg
acttttagtggtcctgtggaagacatgtttggatacagtgtgcagcaatttgaaaatgaa
gagggaaaatgggttcttattggttctcctttggctggtcagccccaaaagaaaacaggt
gatgtctataaatgccctgtaggacagggtaatggtttgccatgtgtaaaattaaatctg
ccagccgacacttcaattcctcaagttacagaagtaaaggagaatatgactcttgggtca
accttagtgacaaatcctaaaggagggtttttggcatgtggacctctttatgcttataaa
tgtggacattcctattacaccactggtatctgctccaacgttagttccaattttgaagtt
gtaaattccattgctccattgcgagaatgcaagtcccggttggatattgtctttgttctt
gatggatctaacagtatttttgaatggaaagatgtcaccaattttttgaagcgaatactg
caaaatatgagtataggcccccatgatacacaggttgggatcgttcaatatggtgaaaat
gtaacccatgaattttatctcaatgcatattcaaccacagaagaggtacttgaagcagca
ggcaaaattaagcagagagaaggatttgagaccatgacagctcttggcattgagacggca
aggaatgaagcatttacaaaagctcatggggcccgcccaggggttcaaaaagtcatggta
gttgtgactgatggagaatctcatgacaattaccgattacaaaaagtgattgatgattgt
gaaaaagacaacatacagagattttctattgctattcttggctcctataacagagggaat
cgaaaccctgagaaattagtggaggaaatcaaatccattgcaagcaagccaactgaaaag
catttctttaatgtctcaaatgaagtagctctccttacaattgttgaagctcttggagaa
agaatatttgctttggaagctaccaatgatcaacaggcagcttcttttgaaatggaaatg
tctcaagttggcttcagtgcccattattctcaggactggatcatgcttggagcagttggg
gcatatgactggaacgggacggtagtcatgttaaaggacaaaaattttctaacaccagca
agtaacgcatttgatgatagcttttcagaaagaaacgaaagccttgcagcatacttaggt
tatgcagtcaattcagcttctgtacctggagatctgctatacattgcagggcaacctcgt
tataatcacaccgggcaagttatcatatatagaatgaaggacactgaaatagaaatactt
cagaaattaagtggtgaacagattggatcgtattatggaagtgttatcacaacaattgat
attgacaaggatacatatacagatcttcttctggtgggagcacctatgtacatggggacc
gagaaagaagaacaaggcaaggtgtacatttattctttaaacaagaaaacctttgaatat
cagatgacacttgagcctataaaacagacttgctgtttggtgcacaaggagaaggattgc
acaaatcacaacaaaaatgagccatgtggagctcgttttgggacatcaattgctcccgta
aaggatctcaatcttgatggtttcaatgatattgtcataggtgctcctctagaagatgat
catcgaggggctgtgtatgtttatcatggaaatgggaagagcataaagaaagaatatgcc
cagcgtattgcttctggtggagatggggaaaagatgaaattttttggacagtcaatacat
ggtgaaatggatttaaatggagatggtcttacagatgttactattggaggcttaggagga
gcagcccttttctggtctcgagatgttgcccaagtaaatgcgtccatgaaattcatgccc
aacaaaattgatattcagaagctcagtagtgacatgcaaaaacaaaaggtgtatattaac
tccacaatttgttttcaagtcagattaaagtcgaaagacaccacaattaatgaaacagat
atacagtactggcttacacttgattcacaaagaaaggtgtctcgaacactttttgctgaa
acaaatgaacggaggattcaaaaaaacatcacagttagaggttcagaatgcattaagcac
aacttctacatgttgggcaagcctgactttcgtgaccctataaaggttttgctggagttt
aatttttctgaccccgagagcggaccaatccttgacagtgagctacccaattcagtagct
gaatatatccatttcacaaaagattgtggaaacaagaacaaatgtatcactgatctacag
ctgactgctaacgcaaccattggaggaagcagtttatctccattcatcatcaaacagaat
aatttgaaattctgggtccaaatgttggtcagaaataaaaaagatagcgcttacaatacg
agagtctatgtgcaacattctccaaatattattttttctggacttgagaaaataccaaaa
gacagctgtgatacggggcagaacatcacttgtaaagtaggctatcccttcctgtctccc
aaggaggagatttacttcgaaatagcagtccagttcaatgtgtcgcatctcctggaaaat
acaacaattcacttttctgttacaagaagagaatctagtccgcatcacatcatcatcgct
gcaaatgacacaatacctgcagtcattaattctactgacaatattggagaagaaattaat
ataaactacttgattgagaaaggagaacatttcttacagccacagcttgcattgcaaatc
tcatttccaaagaatatttcagttgaaaatcaaatcctttacttcaccaggatatcatac
tcagagaatgcaaaatgccaatccagccacccaagtgatttgttaaagattgacatgggc
aaaccattcaaaacatcaaagatacaagaacctctaaaggatcccaacataaattgtgat
ggatatgattgtgcatccattaattgcactatagcaccttcgaatataactcacgtgaat
atttcattcagactctggaagcctactttcataacggcaaaaattcacagcatagaactc
attgtgaaagcaagtctaaggagtgaaaactcattaatgatcttgaagaaagaaaatgaa
aaaatagagacaataattcaaatctcaaaggagcttcttcctggccatgtgccattatgg
gtcattctactgagtgtttttgctggactcctgattcttaccttgcttatatttgcatta
tggaaggctgggtttttcaacaggcccttaagaaagaaaatggagaaatga
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integrated database retrieval system
