Thamnophis sirtalis (common garter snake): 106544296
Help
Entry
106544296 CDS
T06107
Name
(RefSeq) E3 ubiquitin-protein ligase RNF213-like
KO
K22754
E3 ubiquitin-protein ligase RNF213 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106544296
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106544296
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106544296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_5
AAA_22
AAA_7
ABC_tran
MCM
Bac_DnaA
Colicin_D
DUF1033
AAA_16
NACHT
ATPase_2
AAA_SelU
Motif
Other DBs
NCBI-GeneID:
106544296
NCBI-ProteinID:
XP_013916013
UniProt:
A0A6I9XZH3
LinkDB
All DBs
Position
Unknown
AA seq
2091 aa
AA seq
DB search
MALQVKIFTSQYKSFSNMDFLQKSHLQLSTSLLHLGVVINTEACNVYFSQEQCYSVWSLE
LVTGCYVLIFTENVATKAHINCQGGIHSRSLMLEAEQLGRVAHPLRQGKAHLWNCKCAEC
TEQSLPKELLGGLKLEEVVDLRLKEVLHIRKEQKYLGVLLDMLRKVQCYLKVDLTEVEQK
HSKNLAEKTLDDVVKVRGHTSCNDDRIETHLHLSERLKSVSEVFCAYNASHIFSHCWEEA
AKMLRENMEDSGTEETLAIEDVFDCVFDPCFKEFKRIYDSLKLGDLTFAEVNVLSKDFKN
DYKELRSDFKIMCRLQHGDNGEWIDERIQQIQQYHELGLALDSAKVIDKVKDVLKLSGDF
SVLQLLLNLAKGEQGENGEQEAISDDGSSNNIRKINVGNKNELKVFVELASISAGENDME
VDRVACFHDAVFGYSSLLYDLKRGAGFKEFMKCLKNIWKALESDCNLPTKLRDSARYLDW
LKTIKESHGSVELSSISLATSINEKGIYRIKAPEEGQKVCLDTVLNLTVKESHGDQEKTR
HYSLEELQELMNKLMLMSGKEEQSAQVEKFSERRSIPVYWCGPYVSVFFQVQTGISEFLF
KLFILRYLEDADGKIWLRKQCHLYVAEILQPPHSPKKQRGSKFPGLNYSFLDVFPQITCR
SPKEVLCNGSQENLFHDSSDPGVDQGMFCSEAFQRPFQYLLREHRRENLDAFKYRKGSVE
GTPEECLQLLLMYCGVIDPSWSELRNFAWFLNLQLKNCETSVFCNAAFVQDTLQGFKNFV
VKFMILMAKDFATPSLNISDESPGMQVFEDVTEEALAPFLLRKKWESEPHPYIFFNEDCV
SMTFIGFHLQHNNNGSIDAINPLNGNIIKRNVMTLQLYMGLALQRVPFNIDFDALTRAEK
IEKLCMVLGIQWPTDPDETYELTTDNILKMLAIEMRFRCGIPVVLMGETGCGKTRLIKYL
CELRKSGADADNMKLVKVHGGTTADAIYDKVREAEDMAQCNRLNYKFDTILFFDEANTTD
AVSSIKEVLCDHTIEGQPLLPNMGLQIIAACNPYRKHTPKMIQRLESAGLGYRVKAEDTS
EKLGSIPLRQLVYRVHALPPSMIPLVWDFGQLNNITEKLYIEQIVQKLAKSITISATEVQ
MITEVLFKSQTYMRQRKDECSFISLRDVERCVEVFKWFHGHSERLIEHLERSLESNPPKS
AIQRDRIMWSLILSVGVCYHASLEKKEAYWRIICKIFPEPYDNEKVVLEEISLIQDLFLS
GVPDRQSIAKNMALKENVFMMVICIELKIPLFLIGKPGSSKSLAKTIVADAMQGPAAYSD
LYKELKQIHLVSFQCSPHSTPEGIINTFKHCARFQEGKNLGEYVSVVVLDEIGLAEDSPK
MPLKTLHPLLEDGCIDDDPLPHKKVGFVGISNWALDPAKMNRGIFVSRGNLNKNELIKSA
KGICSSEPLLLQKIECFFPIFANAYEEICKSQTKDFFGLRDYYSLVKMLFALTKNSKSIP
GPHEIAEVVLRNFSGKEGVEVLDTFMSKIPEGGDENYKDINTIDLVEQNICSNYQEGECR
YLLVLTENYAALQILQQRFFRDTQPEIIFGSSFPKDQEYTQICRNINRVKICMETGKMVV
LLNLQNLYESLYDALNQYYVQLAGQKYIDLGLGTHRVKCRVHPKFRLIVIEEKKVVYEQF
PIPLINRLEKHYLDINTVLNKWQKTIVEVLKKWVDDFVTVKTEKYFMGQQTYKPSDVFIG
YNSDSCASVVLQVTENLKESLPPAQLSQKVQEQSEMVLLNCATPDSVIRLGDSKLDFLSD
SLAKIYFQQQQHTSFAEFLHRCLRSDSGGLTVFIEMTTFSRLLTAADTEILEAELQHNSD
SLKVLFLQQFDTEYSFLKDIRNFFAVRTDGSKILIIQTDFENGSLSAQLIASARYSAVNE
VNKIQENQARVFIIFITKLSRIEGGSSYIGFHGGLWQSVHIDDLRTSKDMISDITALRNI
TISQLFSENTGESAENPETAGMKEEEETEEKMEVEVSPISEPEIFILDTTILLRSCVQSA
VSMLRDHNEDAGRSAERIAILLKLLSEEDTPQGNFLKITKSRLTYLLKNQE
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcaagtcaagatcttcacatcacaatacaagtccttcagcaacatggatttc
ctgcaaaagagccatttgcagctctccaccagtctactgcacctgggggtggtgataaat
accgaggcctgcaatgtttacttctcccaggagcaatgctacagtgtctggtcattggaa
ctggtgactgggtgctacgtcttgatcttcactgaaaatgtggccacaaaggctcatatc
aactgccaggggggcatccactccaggtccctcatgctagaggcagaacaactaggcaga
gttgcacaccctctccgtcagggcaaagcacatctctggaattgcaaatgtgcagaatgc
acggaacaatcactcccaaaggaattactgggaggactaaaattagaagaagttgtagat
ctgagactaaaggaagtattgcatatcaggaaggagcaaaaatatttgggagtcctcttg
gatatgctcaggaaggttcagtgctacttaaaagtggatttaactgaagtggaacaaaag
cacagcaaaaatctggcagagaaaactttggatgatgttgtgaaagtgagaggacacact
tcatgcaatgatgatagaatagagacccatctccatttgagtgaaagactgaaatctgta
tctgaagttttctgtgcttataatgctagccacattttctcgcattgctgggaggaagca
gccaagatgctgagggaaaacatggaggattcaggcacagaagaaactctagctatagag
gatgtgtttgattgcgtatttgatccttgtttcaaggagttcaaaaggatttatgacagc
ttgaaattgggagacctcacatttgctgaagtgaacgttctctccaaagattttaagaat
gattataaagaactcagaagtgattttaaaattatgtgcagactgcagcatggagataat
ggagaatggatagatgaacggatccagcagatccaacagtaccatgaactgggtttggca
ctggattctgctaaagttattgacaaagtcaaggacgttttgaaactttctggtgatttc
agtgtcctgcaactattgctgaacttagcaaaaggtgaacaaggtgaaaatggagaacaa
gaagccataagtgatgacggcagcagcaacaacatcagaaagatcaatgttgggaacaaa
aatgagctgaaagtgtttgtggagctggcttcaatatctgcaggagagaatgacatggag
gtggaccgtgtagcttgttttcatgatgctgtgtttggctactcctccctgctgtatgat
ttaaagcgaggggcaggatttaaggaattcatgaagtgtttgaagaacatatggaaagct
ctggaaagtgattgtaacctccccacgaagctgcgtgattctgcaagatacttggattgg
ttaaaaactattaaagagagtcatggctctgtggagttgtcatctatatccctagcaacc
agcatcaatgagaaaggaatttatagaattaaggccccagaagaaggacagaaggtttgc
ctggacactgttctgaatctgacagtcaaagaaagtcatggggaccaagagaagactcgg
cactattctctggaagagcttcaagaactgatgaataagttgatgctgatgtccggaaaa
gaagaacaaagtgcgcaagtggagaaattttctgaaaggaggagcatccctgtttattgg
tgtggtccttatgtttctgtattcttccaggttcagactggaatttcagaatttttgttc
aagctgttcatcttacggtatctggaagatgcagatgggaaaatctggcttcggaaacag
tgccacctctatgttgcagaaattctgcaaccaccccactcaccaaaaaaacaaagagga
tctaaatttccaggattgaactacagtttccttgatgtattcccccaaataacttgcaga
tctcctaaagaagtactatgcaacggtagtcaggagaatttatttcatgacagcagtgat
cctggagtagatcaaggaatgttctgcagtgaagcttttcagagaccattccagtatttg
ttacgagaacacagacgtgaaaatcttgatgcgttcaagtatagaaaaggctcagtggaa
gggactccagaagaatgtctacaattgctcttgatgtactgtggagtgattgatccttct
tggtcggaacttagaaactttgcttggtttcttaaccttcagctgaaaaattgtgaaacc
tctgttttctgtaatgctgcttttgtccaggacactttgcagggctttaaaaattttgtg
gtcaaatttatgattttaatggcaaaggattttgcaactccttcccttaacatttctgat
gaaagccctggaatgcaagttttcgaagacgttactgaggaagcccttgctccatttctg
ctccggaaaaagtgggaatctgaaccccatccatacatattctttaatgaggactgtgta
tctatgactttcatcggctttcatctccagcacaataacaacggcagcattgatgccatc
aatcctttgaatggcaatattatcaagagaaatgtcatgacccttcaattgtacatggga
ttagctcttcagagagttccattcaatattgattttgatgcactgactagagctgagaaa
attgagaaactttgcatggtcttggggatccagtggccaactgatcctgatgaaacgtac
gaacttacaacagacaatatcctgaaaatgcttgccattgaaatgagatttaggtgtgga
attcctgttgtcctgatgggagaaaccggctgtgggaaaaccagacttataaaatacctg
tgtgaactgcgtaagagtggtgcagatgctgataatatgaagcttgtcaaagttcatgga
ggtaccacagcagatgcaatctatgataaagtgagggaagctgaagatatggcacaatgc
aataggttgaattataagtttgacacaattttattttttgacgaagccaacaccacagac
gcggtcagcagcatcaaggaagtgttatgtgaccacacaatagaaggacagcctttactg
cccaacatgggtttacagatcatagctgcatgcaatccttaccgcaaacacacaccaaaa
atgatccaacgcttggagtcagctggactgggttatcgtgtcaaagcagaggacaccagc
gaaaagcttggttctatcccccttaggcagcttgtttaccgtgttcatgcactcccacca
agcatgatacctttggtgtgggattttgggcaattgaacaatatcactgaaaaactgtac
atagaacagattgtgcaaaaacttgccaagtcgatcacaatatctgctactgaggtccaa
atgattactgaggtgctttttaagtcacagacctacatgagacagcggaaagacgaatgc
agctttatcagcctgagagatgttgagcgttgtgtagaggtcttcaaatggtttcacggc
cacagtgaacgtcttattgaacatctggagaggtctctggaaagtaatcctcctaaaagt
gcaatccagagagacagaataatgtggtctttgattctttctgttggtgtttgctaccat
gcttccctggaaaagaaagaggcctactggagaattatctgcaaaatatttccagaacca
tatgataatgaaaaagtcgttcttgaagaaattagcttgattcaggatctttttttgagt
ggtgtgcctgataggcaaagtatagcaaaaaacatggctttgaaggaaaatgtgttcatg
atggtaatctgcattgaacttaaaatccctttgtttcttattgggaagccgggcagctca
aaatctcttgccaagaccatcgtggctgatgccatgcagggtccagcagcctattcggac
ctttataaggaacttaagcagatccatttggtgtcttttcagtgcagcccacattcaacc
cctgaggggatcataaatacattcaagcattgtgctcgtttccaggaagggaaaaacctc
ggcgaatatgtctctgtggttgtattagatgaaattggattggcagaagactctcccaaa
atgcctctgaagactcttcaccctctattagaagatggatgcattgatgatgatccactt
cctcacaagaaggttggctttgttgggatatctaactgggccctagatccagctaaaatg
aatcgaggcatctttgtatctcgtggaaacctgaataaaaatgaactcataaaaagtgca
aaaggtatttgctcttcagaacctttgttgctacagaaaattgagtgtttctttcctatc
tttgcgaatgcatatgaagaaatttgcaagagtcaaactaaggatttttttggattgcgt
gactattacagtcttgtcaaaatgttatttgctttgacaaaaaattctaaaagcatacca
ggtccccatgaaatagcagaggtggttctccgaaatttcagcggcaaagaaggcgttgaa
gtcttggatacttttatgtctaagattccagaaggaggagatgaaaattataaggatatc
aatacaattgatttagttgagcaaaacatttgtagcaattaccaggagggtgaatgccga
tatctgttagtattaacagaaaattatgcagcgcttcaaattctccaacagcgtttcttt
cgagatactcaaccagaaattatttttggttccagctttcccaaagatcaagaatacact
cagatttgtagaaacataaaccgagtcaaaatttgcatggagactgggaagatggtggtt
cttctcaacctacaaaacctttatgagagcctctatgacgccctcaatcagtattatgtc
caacttgctggtcaaaaatacattgacttgggcttggggacccatcgagtgaaatgcaga
gtgcatcccaaatttcgactgattgtcatcgaggagaaaaaggtggtgtacgaacagttc
cccattccattgattaaccggcttgaaaaacactatctggatattaatactgtactgaac
aagtggcaaaagaccattgtggaagtcttgaagaaatgggtggatgactttgtaacagtt
aaaactgagaaatattttatgggtcaacaaacatacaaaccttctgatgtttttattggc
tacaattcagactcttgtgcttcagttgtcctgcaggtgacagaaaatctgaaagagtct
cttcctcctgcacagctaagccagaaagtccaagagcagtccgagatggtcctcttgaac
tgtgccaccccagattctgttatccgtctcggagattctaaactggactttttaagcgat
agcttggctaagatatactttcagcaacagcagcatacttcctttgccgaatttttgcac
agatgccttcggtcagactctggaggccttacagtgtttattgagatgacaaccttctcc
aggctcctgactgcagcagacacagagattttggaggcagaattgcagcataattcagac
agcctgaaagttttgttcttacaacaatttgacacagagtactcatttttgaaggacatt
cggaatttttttgctgtgaggacagatgggagtaaaatcctcattattcagactgacttt
gaaaatggatcacttagtgcccagctcattgcctcagccaggtattcagctgttaatgaa
gtcaacaaaatacaggagaatcaagccagggtatttataattttcatcactaagctgtca
cgaatcgaaggaggaagttcctacataggatttcatggagggctgtggcagtctgtgcat
attgatgatctaagaacctccaaggatatgatctctgatataacagccctcagaaacatc
accatcagccagctgttttctgaaaatacgggagagtctgcagagaatcctgaaactgca
gggatgaaagaagaagaagaaacagaagagaagatggaggtggaggtgtcaccaatatct
gaaccagaaatatttattttggatactaccattctcttgaggagttgtgttcaaagtgct
gtcagcatgctgagagaccacaatgaggatgccggtcgtagcgctgagagaattgcaatt
cttcttaaactcctgtctgaggaagataccccgcaaggcaacttcctgaagattacaaag
agccgtcttacttaccttttgaaaaatcaggaa
DBGET
integrated database retrieval system
