Thamnophis sirtalis (common garter snake): 106544297
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Entry
106544297 CDS
T06107
Symbol
ATG16L2
Name
(RefSeq) autophagy-related protein 16-2
KO
K20868
autophagy-related protein 16-2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106544297 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106544297 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106544297 (ATG16L2)
Membrane trafficking [BR:
tsr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
106544297 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
106544297 (ATG16L2)
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106544297 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
ATG16
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
106544297
NCBI-ProteinID:
XP_013916014
UniProt:
A0A6I9XJQ4
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MAEGGLCRRRRWKSHIVGQLQQRDRAQKARFSDLVQAYTKVLEKSNLADLSVPFQTPSGD
HQMGGPSCSPNHPSSACVDPDTVWDPSTVLTCLQNRHEASLLELETANGEMAYQVYELNQ
LLQAKDAALGDQEGRLAILSCQLSAVQAWRCQLQNQAEELRGRNGAQKSQYDSLQRHFQQ
QDGAFRQAQEKGEQLLLQVLQGKVASAQQENERIEREKQTQLARDLQAATTSLLSVKIDS
EKMKTGEKKSAGGQESEEKKGGEKLWKRPFRSASATALSTARYKEVVKGWFDFRLKRGNS
VSSGSMDQYYSLPTCVATGLPSAVADEQEGHLSEIHAVTFSPNSGLLATGGADRLVKLWS
VAGGCLEKKEALEGSSGSITSLAFDPSGCCVLASTYDNTAQLWKVGDSRVKEILTGHTNK
VTAAKFRSTWQRAVTGSRDRTVKEWDLVKGACSRTIQVFSYCNDVVCCNNVIVSGHHDKM
IRFWDSRDPHCTQVVPVGGKVTSLSLSPDQLQLLSCSRDNALKVLDLRMHTVQQVF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggccgagggaggcttgtgccgccgccgccgctggaagagccacatcgtcgggcagctg
cagcagcgcgaccgggcgcagaaggcgcgcttctcggatctggtgcaagcctataccaag
gtgctagaaaaatccaacttggctgatctttctgtgcctttccagaccccctctggggat
catcagatggggggtccctcttgcagccccaaccacccgtcttccgcttgcgtcgatccc
gacacagtttgggatccttcgacggtgttgacgtgccttcagaatcgtcacgaagccagc
ctcttggagttggagacggccaatggggagatggcctaccaggtgtatgaattgaaccag
ttgctccaagcgaaggatgcggcactgggggaccaggagggcaggctggccatcctgagc
tgccaactttcggcggtgcaggcctggcgctgccagctgcaaaaccaggcggaggagctg
cggggcaggaacggtgcgcagaaatcccagtacgattctctgcagaggcatttccagcag
caggacggggcatttcgccaggcgcaggaaaagggggagcagctactcctacaagtcctc
caggggaaggtggcatcggcccagcaggagaacgagagaatcgaaagggagaagcaaaca
caactcgccagggatctgcaggcggccaccacgtccctactcagtgtaaagatagactcg
gaaaaaatgaaaacgggagagaagaaatcggctggcggacaggagtccgaagagaagaaa
ggaggtgaaaaattgtggaaaagacccttcaggtcagcatctgccactgcgctcagcacc
gccaggtacaaggaggtggtgaaaggctggtttgatttcaggctcaagcgtgggaattcg
gtcagcagcgggtcgatggaccagtactacagcttgcctacctgcgtggccaccggcctc
ccttccgccgtggccgatgaacaagaaggccacctctcggagatccacgcggtcaccttc
agcccaaactcaggcctgctggccacggggggcgcagacaggctggttaagctttggagc
gtggctggaggctgcttggagaagaaggaagccttggaagggtccagcgggagcatcacc
agcctggccttcgacccctcgggctgttgcgtcttagcctccacgtacgacaacacggcg
cagttgtggaaagtgggggacagcagggttaaggaaatcctcacgggacacacgaacaaa
gtgacagctgctaaattcaggtccacctggcaacgggctgtgactggcagccgagaccgc
accgtgaaggagtgggacttggtcaaaggggcatgttcaaggaccatccaggtcttctca
tactgcaacgacgttgtgtgttgcaacaacgtcattgtgagtggccaccacgacaagatg
atccgtttctgggacagcagggaccctcactgcacgcaggtggtccccgtgggaggaaag
gtgacctcgctgagtctcagccccgatcagctgcagctgctgagttgttcccgggacaac
gccctcaaggtccttgacctccggatgcacaccgtccagcaggtgttc
DBGET
integrated database retrieval system
