KEGG   Thamnophis sirtalis (common garter snake): 106544543
Entry
106544543         CDS       T06107                                 
Symbol
POLR2K
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03020  RNA polymerase
tsr03420  Nucleotide excision repair
tsr04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106544543 (POLR2K)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106544543 (POLR2K)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    106544543 (POLR2K)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsr03021]
    106544543 (POLR2K)
   03400 DNA repair and recombination proteins [BR:tsr03400]
    106544543 (POLR2K)
Transcription machinery [BR:tsr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     106544543 (POLR2K)
  RNA polymerase III system
   RNA polymerase III
     106544543 (POLR2K)
  RNA polymerase I system
   RNA polymerase I
     106544543 (POLR2K)
DNA repair and recombination proteins [BR:tsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106544543 (POLR2K)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 A2L_zn_ribbon MCM_OB HypA Cytochrome_C7 DUF2252 DmmA-like_C DUF5816 Zn_ribbon_13
Other DBs
NCBI-GeneID: 106544543
NCBI-ProteinID: XP_013916314
UniProt: A0A6I9XKI5
LinkDB
Position
Unknown
AA seq 65 aa
MERAGFQQDMEEDAPPPKQQPMIYICGDCHKENEIKARDPIRCRECGYRIMYKKRTKRLV
VFDAR
NT seq 198 nt   +upstreamnt  +downstreamnt
atggaacgtgccggctttcaacaggatatggaagaagatgctccccctccaaagcagcaa
ccaatgatatacatctgtggagattgtcacaaagaaaatgagataaaagcaagagatcct
atcagatgcagagagtgtggttacagaataatgtataagaaaagaacaaaaagattagtt
gtatttgatgcccgataa

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