Thamnophis sirtalis (common garter snake): 106544559
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Entry
106544559 CDS
T06107
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106544559
Membrane trafficking [BR:
tsr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106544559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_C
RRM_fung
DUF3482
Motif
Other DBs
NCBI-GeneID:
106544559
NCBI-ProteinID:
XP_013916333
UniProt:
A0A6I9Y091
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MAQSQWDLMTPFQVGAKHIFIASFFEGLQRIILFTEDENVFKMTYESEKVELAEQEIIVS
LQDVGISLVNNYSRQEIAYIGITSSDIIWETKPKKKSRWKPLSVKQTDKLEKEFVEYCDN
SPTENKIVELDDNIPQVCLTPTGNNMKILQPYEFPVRRSFLPALKVQYSTSEHQSSFRVQ
IYRIQIQNQIPGAIFPFVFYPIKPPKSISLDSEPKPFTDVSIVMRTAGHSQISRIKYFKV
LIQEMDLRLDLGFLTALSEFFTHVDELPKDQEIELFKKDVESAQEELKNAVSTDTSQISL
YEYFHISPIKLHLSFSLSTGREENNKDQKCKELIPVQSLNLLLKSIGATLTDVQDVVLKL
AFFELNYHFCTTQGLQWAVIMHYSKQAIKQMYVLVLGLDVLGNPFGFIRDLSEGVEAFFY
EPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASRITGAMAKGVAAITMDDDYQQKR
REAMNKQPAGLKEGFTRGGKGLVSGFVSGITGIVTKPIRGAQKEGAAGFFKGVGKGLVGA
VARPTGGIIDMASSTFQGIKRATNASEDVLSLRPPRFFSDDGVIRPYRLRDGAGSQMLQN
IENGRFAKLRYFTHAMVNNTDLLMVTKSGILFVTRGTFGQLTCEWQYTYDEFTKKPFIID
GRRLRIEAKERVKSVFHAKEFGKIINFKTPEDAKWILSKLEEKVKEIQPKL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtcgcagtgggatctgatgacaccatttcaggtgggagccaagcacattttt
atagcttcattttttgaaggtttgcagcgtataatcttattcactgaagatgaaaatgtt
ttcaaaatgacatatgaaagtgaaaaagtggaattagcagaacaagaaataattgtgtca
ttgcaagatgttggaatttctttagtaaataactattcaaggcaggaaattgcttacatt
ggaatcacaagctctgatataatttgggagacaaaacccaagaaaaagtcaagatggaag
ccactaagcgtgaagcaaactgacaagctggagaaagagtttgttgaatactgtgataac
tcacctacagaaaataaaatagtggaacttgatgataacattccgcaggtctgtttgact
cctactggtaataacatgaaaatattgcagccatatgaatttcctgtgagaagaagcttt
ttgccagctttaaaagtacaatacagtacctctgaacatcagtcttctttcagagttcaa
atctatagaatacagatacaaaatcagattcctggagccatatttccttttgtgttctat
cccattaaacctcccaagtccatctcattggattcagaacccaagccatttactgatgtc
agtattgtgatgagaactgcaggacattctcaaatatcacgcataaagtattttaaagtt
ttaattcaagagatggatctccgattagatcttggtttccttactgcgctgtctgagttt
tttacacatgttgatgaacttcccaaagaccaagagattgaactttttaaaaaggatgta
gaatctgcacaggaagaattaaagaatgcagtatcaactgacacatcacaaatcagttta
tatgaatattttcatatctctccaatcaagctgcatttaagcttttcactcagtactggt
agagaagagaacaacaaggaccaaaaatgcaaggaactgattccggttcagtccttaaac
ctcttgttaaagagcattggtgccacacttacagatgtgcaggatgttgttcttaagttg
gctttctttgaactgaactatcacttctgtactacccaaggattgcagtgggcagttatc
atgcattattcaaagcaggctattaaacaaatgtatgttcttgttcttggcctggatgtt
ttgggcaatccatttggattcataagagatttgtctgaaggagttgaagcatttttttat
gagccttatcagggggctatccagggtccagaagaatttgtagaaggaatggcactagga
ttaaaagctttagttgggggtgctgttggtggactagctggtgctgcttcaagaataact
ggtgctatggctaaaggagtagcagcaataactatggatgacgattatcagcagaaacga
cgggaagcaatgaataagcaacctgctggcctgaaggagggctttactcgtggaggaaaa
ggcttagtatctggttttgtcagtggcataacaggaatagtaaccaaaccaataagagga
gcccaaaaggaaggagcagcaggtttcttcaaaggagttggaaaaggattagtaggagca
gtggcaaggcctactggaggaataatagatatggctagtagcacttttcaaggaattaaa
agagccacaaatgcttctgaagatgtcttaagcttgcgtcctccacgcttctttagcgac
gatggagtcattagaccatacagattaagagatggtgctggaagtcaaatgttacagaat
attgaaaatggaagatttgcaaaactgcgatactttacacatgcaatggttaataataca
gatttattaatggtcacaaaaagtggcatactgtttgtgacaagaggtacgtttggacag
ttaacatgtgaatggcagtacacgtacgatgaatttaccaagaaaccattcattattgat
ggacgaaggttgcgcattgaagcaaaggaacgagtgaagtctgtatttcatgccaaagaa
tttggaaaaataattaattttaaaacaccagaagatgcaaagtggatcctctctaagctg
gaagaaaaagtaaaggagattcaaccaaaactatga
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