Thamnophis sirtalis (common garter snake): 106544671
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Entry
106544671 CDS
T06107
Name
(RefSeq) desmoglein-1-gamma-like
KO
K07599
desmoglein 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106544671
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106544671
Cell adhesion molecules [BR:
tsr04515
]
Cadherins
Major cadherins
106544671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
106544671
NCBI-ProteinID:
XP_013916493
UniProt:
A0A6I9Y0M1
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MAEIENMVSLDFSIGSFHVEVKEWNEKGMWRWKSHRRQKREWIKFAAACREGEDNSKRNP
IARIRSDCEKTQPIIYKISGVGIDQHPVGIFVINQKTGEINITKIVDREETPMFVIHCHA
INVMTGKSIETPLDLRVRVLDINDNPPIFTQHMFSGSIIESSMENTFVMKITATDADEPN
NLNSKIAYKIESQSPAGPLLFILNTENGELHIAKALDREEQSQYTLVVKASDRNGGPEGI
SSECLCQVKVQDVNDNFPTLSQSSFSVSILENSLSQELLRIQVFDADQEFTDNWFAEFFF
ISGNENHNFEITIDRTTNEGILSVIKEIDYEQFSTININIGVRNVAPFHSSVASLYQSVG
TPIVVQITNVVEGPAFSPATLTITASESLTSTTILTYTVATFQAIDQDTGKIATNIRYEI
GRDPAAWFQINPQTAVITFKRTIDRESIYVVNGVYTAEVLAITRDSPYTTATGTIMLTIQ
DVNDNCPILTDEIRRVCMDSPSVVITAKDPDDSPYGPPFTFSIIAQPQDSWWAIKTLNGT
SATLYTDIIDFVIFEVQVKVVDNSGKSCEKHVVIPLQACECDQNGMCVKMATKRVRITVI
GGGGAGGGGADGGGAGGGGAGGGGAGGGGAGGWGTGSGGTGGGGAGGEGGDGWGTGSGGT
GGGGTGGWGTGGGDGAGGTGNEHSHSGTSGHVIDVGGTRQNSGDTSLSAAAIGLMILGGL
IFVLVPILMSQSDCFGYLGSRSAGGVGAGFEPVPECTEGAIHSWGIEGAQPEDRDVSNIC
APVTAASKGEFADSSDIYTTKYGDGGMVSSGIEETTGLGATKGYGTALGYGTTTGYGTMG
RKDTFGGIKEYRESGVNMAFLDSYFSEKAFAYADEDEGRPANDCLLIYDHEGIGTPVGSI
GCCSFIGDDLDDSYLDTLGPKFKTLAEICLGREIEHFPDLNMPLPNPDIEINLPPPGTTI
VVNTSSSMPQPTPVGGSTVVTENTYTTTSNVQPPRPMPDPMLHGNVVVTETYTSGSTMKP
PTLNVDPLSGSNVVVRERVLGPGPVTDLHGMIDIPDLPGGSNVVVTERVIAPNSRLPASL
SIPNLTEGSNVVVTERVIRPAASVHGNMTLPSDLSSARNVFVTERVLSGTGPSGGPGNLS
SGPNSLLASDNILSQAIGTASPGSTRRRVTKYSTIQYSN
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggcagagattgagaatatggtgtctctggatttcagcatcggttcttttcatgttgag
gtaaaagaatggaatgaaaaaggaatgtggagatggaaatcccatcggaggcagaaacga
gaatggattaaatttgctgctgcctgtagggaaggagaagataattcaaaaagaaatcca
attgcaagaatccgatcagattgtgaaaaaacgcagccaattatatataaaataagtgga
gtaggcattgatcaacatcccgtgggaatatttgtcatcaaccagaagactggtgaaatt
aatataacaaaaatagtagatcgagaagaaactccaatgtttgtgattcactgtcatgca
ataaatgttatgactggaaaatcaatagaaacacctcttgatcttcgtgttcgggttctg
gacataaatgacaatccaccaatatttacacaacacatgttctccggatcaataatagaa
agcagcatggagaatacatttgtaatgaaaataactgctactgatgctgatgagccaaat
aatttaaattccaaaattgcttacaagattgaaagccagagtcctgcaggaccattattg
tttatcttgaacacagagaatggagaacttcatattgcaaaagctcttgatagagaggaa
caaagtcaatatactctggttgtcaaagcctccgacagaaatggagggccagaaggaata
tcatcagaatgtttgtgtcaggttaaagttcaggatgtgaatgataattttcctactctt
tcacagagctcgttttcagtatcaattctagaaaattcactgagtcaggagctgctgagg
atacaggtatttgatgcagatcaagaatttacagataactggtttgcagaatttttcttt
atctctggaaatgaaaaccacaactttgagatcacaatcgacagaacgactaatgaaggt
atcctgagtgttataaaggaaattgattatgaacaattttcaaccataaacattaatatt
ggcgtgcgaaatgttgcccctttccactcttctgtggcttctctttatcaatctgttgga
accccaattgtggtacagataactaatgtagttgaaggaccagcatttagtccagctaca
ctgaccatcactgcatctgagagcttaacaagcacaactatactcacttatactgttgca
acattccaagccattgatcaggatactggaaaaattgctacaaatattcggtatgagata
ggccgtgatcctgctgcctggtttcaaatcaatcctcaaactgctgtcatcacttttaag
agaactattgatcgagaatcaatttatgtagttaatggggtatacacagcagaggtgctt
gctatcaccagagacagcccttacacaacagccactggtactattatgcttactattcaa
gatgtcaatgataactgtcccattctgactgatgagatcaggagagtatgtatggacagt
ccaagcgtggtgatcactgctaaagatccagatgattctccatatgggccaccctttaca
tttagcattatcgctcagcctcaagacagctggtgggctatcaaaacattaaatggtact
tctgcaactctatacactgacatcatagattttgtaatttttgaggtccaagtcaaagtg
gttgacaacagtggcaaaagctgtgaaaagcatgtggtaattcctctgcaagcctgtgaa
tgtgatcaaaatggaatgtgtgtcaaaatggctaccaagagagttagaattacagttatt
ggtggtggtggagcaggtggtggaggagcagatggtggtggtgcaggtggtggaggtgca
ggtggtggaggagcgggtggtggaggagcgggtggctggggaacaggtagtggaggaaca
ggtggtggaggagctggtggtgaaggaggggatggctggggaacaggtagtggaggaaca
ggtggtggaggaacaggtggctggggaacaggtggaggtgatggtgcaggtggcactggt
aacgaacattcacatagtggcactagtggacatgtgattgacgtaggaggaacaaggcaa
aattcaggagatacgtctcttagcgctgctgccattggcctgatgattcttggaggatta
atatttgtgttggtaccaattctgatgtcacagagtgattgttttggttatctgggatcc
agatctgctggtggagtgggagctggatttgagcctgtgcctgaatgcacagaaggagct
attcattcctggggaattgaaggagcacagcctgaagaccgggatgtgtcaaatatctgt
gcaccagtaactgctgcaagtaaaggggagtttgcagactcttcagatatctacacaact
aaatatggtgatggaggaatggtgagttcaggaattgaagaaacaacaggacttggagca
acaaaaggctatggaactgcacttggttatgggacaaccacaggctatgggacaatggga
cggaaagatacatttggaggaataaaagaataccgagaaagtggtgtgaatatggctttc
ctagacagctacttctctgagaaagcatttgcctatgctgatgaagatgaaggcagacct
gcaaatgactgtctcctaatatatgatcatgagggcataggcactcctgttggttccatt
ggctgttgcagttttattggggatgatctggacgattcctacttggataccctgggtcct
aaatttaagaccttggcggagatctgcttaggaagagagattgagcacttcccagatctc
aatatgcctctgcccaatcctgatattgagataaatttgccaccacctggaaccacgatt
gttgttaacacatcttcatctatgcctcaacctactcctgttggtggtagcacggtcgtt
acagaaaatacttacaccaccacttccaatgtacaacctccaaggccaatgcctgatcct
atgctccatggtaatgtagttgtaacagaaacatatacttcaggctcaacaatgaaacct
cctacacttaatgttgatcctctgagtggatcaaatgttgtagtcagagaaagagtgctg
ggtcctggcccagtcactgatttgcatggtatgatagatattcccgatctaccaggtggg
tcgaatgttgtggtcacagaaagagtaattgctcctaattcaagattaccggcttctttg
agcattcctaatctgacagaagggtcaaatgtggttgtgaccgaaagagtgattcgacct
gctgctagtgtacatggcaacatgaccctcccttctgacctatcaagtgcccgtaatgtg
tttgtaaccgaaagagttttgtctggaacaggaccgagtggtggccctgggaatctaagt
agtggtcctaattcattgttggcttctgataatattcttagtcaggcaattggaacagct
tctcctggttcaactcgaagaagggtaacaaaatacagcactatacagtattctaattag
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