Thamnophis sirtalis (common garter snake): 106544714
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Entry
106544714 CDS
T06107
Symbol
GCNT1
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00512
Mucin type O-glycan biosynthesis
tsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
106544714 (GCNT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsr01003
]
106544714 (GCNT1)
Enzymes [BR:
tsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
106544714 (GCNT1)
Glycosyltransferases [BR:
tsr01003
]
Glycan extension
O-Glycan
106544714 (GCNT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Branch
FBD
Motif
Other DBs
NCBI-GeneID:
106544714
NCBI-ProteinID:
XP_013916546
UniProt:
A0A6I9XR57
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MFERFQMLSEMLRRKLRHCAFLRFKPLWVLICTFGIWSYITIHQKPSYQDYEHLELTSEH
PNTVNCSKILEGDKEEIEKVKLELLKVSFRRTPKMTPNDYINMTVDCASFIKKRKYIMEP
LSQEEAEFPIAYSIVAYHKINMLEGLLRTIYAPQNYYCIHVDKKSPESFLAAVKSIASCF
PNVFVASQLESVVYASWSRVQADLNCMKDLYRRNVSWKYLINLCGMDFPIKTNQEIVEKL
KALNGENSLETEKMPSNKEVRWKKHYEVVDGKVKKMGIDKQHPPFNIPIFSGSAYFVVNR
KFVEYVLENSKILAFIEWAKDTYSPDEYLWATIQRIPEVPGAVSASDKYDVSDMNAVARF
VKWDYFEGDVSKGAPYPPCNGVHVRSVCVFGVGDLSWMLQKHHFFANKFDTDVDPFAIQC
LEEHLRDKVLQQRRH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaggttccaaatgttgtctgaaatgctaaggaggaaacttcgtcactgtgct
ttcttacggtttaagcctctttgggtgttaatttgtacatttggaatctggtcttatatt
acaattcaccagaaaccaagctaccaagattatgagcatttggaattgactagtgagcat
cctaatacagtaaactgttccaagatactagagggtgacaaagaggaaattgaaaaagta
aagcttgaactgttaaaagtgtcctttaggagaacccccaaaatgactccaaatgactat
atcaacatgacagttgattgtgcctcctttattaagaagcggaaatatattatggaacct
ctcagccaagaagaagcagaatttcccattgcgtattcaatagtggcttatcataaaatt
aatatgcttgagggacttctgagaaccatatacgctcctcaaaattattactgcattcat
gttgacaagaagtccccggagtctttcttggcagcggtaaaaagcattgcatcatgtttt
cccaatgtcttcgttgccagccagttggaaagtgtagtgtatgcctcatggagccgggta
caagctgacctcaactgcatgaaggacctctacagaaggaatgtgagctggaagtacttg
atcaatctctgtggcatggatttcccaatcaagaccaatcaagagattgtggagaagttg
aaagccctcaatggtgaaaatagtttagaaacggaaaaaatgccttcaaacaaagaggtg
aggtggaagaaacattatgaagtagttgatggcaaggtaaaaaaaatggggatagacaaa
cagcatccacctttcaacatacccattttctctggaagtgcctattttgttgttaatagg
aaatttgtggaatatgtattagagaacagcaaaatccttgcttttatagaatgggctaaa
gacacttacagtcctgatgaatacttatgggctacaatccagcgaatccctgaagttcct
ggtgcagtctctgccagtgacaaatacgatgtttccgatatgaatgccgttgcccggttt
gtgaagtgggattactttgagggggatgtatccaagggtgctccttacccaccttgcaat
ggagttcatgtccgttctgtatgtgtctttggagtcggagacttgagctggatgttacag
aaacatcatttttttgccaacaagtttgatactgatgttgatccttttgcaattcaatgt
ctggaagagcatttacgagacaaagtgctacaacaacgcagacattaa
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