Thamnophis sirtalis (common garter snake): 106544906
Help
Entry
106544906 CDS
T06107
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04080
Neuroactive ligand-receptor interaction
tsr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106544906 (GABRA1)
04082 Neuroactive ligand signaling
106544906 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106544906 (GABRA1)
Ion channels [BR:
tsr04040
]
Ligand-gated channels
GABA-A
106544906 (GABRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
106544906
NCBI-ProteinID:
XP_013916821
UniProt:
A0A6I9XSV6
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MMHLLYDHFWAWVLLMSTLPGKSYGQTSLQDEIKDNTTIFTRILDRLLDGYDNRLRPGLG
ERVTAVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMQVLRLNNLMASKIW
TPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPL
KFGSYAYTKSEVMYEWTREPARSVVVAEDGSRLNQYDLMGQTVDSGIVQSSTGEYVVMTT
HFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARN
SLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLI
MKNNSFTAPAPATSFTPNIARDPGLATIAKSATIEPKDVKAETKPPEPKKTFNSVSKIDR
LSRIAFPLLFGIFNLVYWATYLNREPQLKDKNPPH
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatctcctttatgaccatttttgggcctgggttcttcttatgagcaccttacct
ggaaaaagttacggacaaacttccttacaagatgaaattaaagacaacacaactatattc
actcgtattttggatcgtttacttgatggttatgataaccgtctaagaccaggattggga
gagcgtgtaactgcagtgaagactgacatctttgttaccagctttggtcctgtttcagat
catgatatggaatatacaatagatgtatttttccgacaaagctggaaagatgaaaggctg
aagttcaaaggaccaatgcaagtactccgactgaataatttaatggctagcaaaatatgg
acaccagatacatttttccacaatggaaagaaatcagtcgctcacaacatgactatgcct
aacaaacttttgcggattacagaagatgggacactgctttacacaatgagacttacagtg
agagcagaatgcccaatgcatttagaagactttcccatggatgcacatgcttgcccattg
aaatttggaagctatgcttacacgaaatctgaggtaatgtatgaatggacccgtgaacct
gcacgttctgttgttgttgctgaagatggctctcggctgaatcaatacgatctcatggga
caaacagtggattctggaattgtgcaatccagcacaggggaatatgttgtgatgaccacc
catttccatttgaagagaaaaattgggtactttgtcattcaaacatacttgccctgcata
atgacagtaattctatcccaagtatctttctggctgaacagagaatccgttccagcaaga
accgtgtttggtgtaacaactgtgctaacaatgaccaccttgagcatcagcgcacggaat
tctcttcccaaggtagcttatgctaccgctatggattggttcatagccgtgtgctatgca
tttgtcttctcagctctgatcgaatttgccacagtgaactactttacaaagagaggttat
gcatgggatggcaagagtgtagttccagaaaagccaaagaaagtgaaggatcctctcatt
atgaaaaacaactcgttcacagcaccagcacctgcaaccagctttaccccaaatattgca
agagaccctggactagctaccattgctaaaagcgcaacgatagagcccaaagacgtgaaa
gcggaaacaaagccacctgaacccaagaaaacgtttaacagtgtcagcaaaattgatcga
ctatcaagaatagcgttcccactgctctttgggatttttaatttagtgtactgggctacc
tacttaaatagagagccccagcttaaggacaaaaaccctccacactag
DBGET
integrated database retrieval system
