Thamnophis sirtalis (common garter snake): 106544955
Help
Entry
106544955 CDS
T06107
Symbol
HGS
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03250
Viral life cycle - HIV-1
tsr04144
Endocytosis
tsr04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106544955 (HGS)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106544955 (HGS)
04145 Phagocytosis
106544955 (HGS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106544955 (HGS)
Membrane trafficking [BR:
tsr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
106544955 (HGS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
UIM
FYVE_CARP1-2
CID
Motif
Other DBs
NCBI-GeneID:
106544955
NCBI-ProteinID:
XP_013916854
UniProt:
A0A6I9XLX5
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MGRGGGTFERLLDKATSQLLLETDWESILQICDMIRQGDTQAKYAVGAIKKKVNDKNPHV
ALYALEVLESVVKNCGQTVHDEVANKQTMEELKELFKRQVEANVRNKILYLIQAWAHAFR
NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVVTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEHLNKKGEGKGTATTELPPEYLTS
PLSQQSQLPPKRDETALQEEEELQLAIALSQSEAEEKERMRQKSTYSTYPKAEPTPITSS
APPGGTLYSSPVNSSAPLAEDIDPELARYLNRNFWEKKQEEVRKSPTPSAPLSMGEPATQ
TTEVPPAPLSVVEQQYQNGETDESHEQFLKALQTAVTTFVNRMKSNHLRGRSITNDSSVL
SVFQSINSMHPQLLELLNQLDERRLYYEGLQDKLAQIRDARGALNALREEHREKLRRAAE
EAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQEQEKERQLRLEQQKQTIQMRAQM
PAFSLPYAQLQAMPPASGVIYQPSGPTSFPGTFSPASSVEGSPMHTVYMSQSAQGSTGPY
TAMPVAGTDPGMVSTYMYSTGNNNTQPAPQAQANPAYSSYQPTPTQGYQNAPAPSQTQTV
PAMTQAPPQSGGTMGYMGNQSMPMGYQPYNMQNLMSTLPGQESGLSSLPPQQPYLSGQQP
MYQQMAPSGGPPQQQPPPQQTSSQVQQVQGGSGEAQLISFD
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaggaggcggcaccttcgagcgccttttagataaggccacaagtcagcttctg
ctggagacagactgggaatctattctacagatctgtgatatgattcgtcagggagatacc
caggctaagtatgctgtgggtgcgattaagaaaaaagtcaatgataagaatcctcacgtg
gcgctctatgcactagaggtcttggaatctgtagtaaagaattgtggtcagacagtccat
gatgaggtggctaacaagcagaccatggaggaattgaaggaattgttcaagagacaagtt
gaggcaaacgttcgcaacaagatcctgtacctgatccaagcatgggcccatgccttccgc
aatgagcccaaatacaaggtggttcaagatacctaccagatcatgaaggtagaaggtcat
gtttttccagaattcaaagaaagtgatgcgatgttcgccgcagaaagggctcctgattgg
gtggatgcagaagaatgccaccggtgccgagttcaatttggcgtggtgacgcgcaagcat
cattgtcgggcctgtgggcagatcttctgtggaaaatgctcatccaaatattccaccata
cccaaatttggcatagagaaggaagtacgagtatgtgagccttgctatgaacatctcaac
aagaagggagaaggaaaaggaactgctaccacagaacttcctccggaatacctgaccagc
cctctttcacaacaatcccagctgcccccaaagcgtgatgaaactgccctgcaggaggaa
gaagagctacagctggcaattgcactttctcaatctgaggcggaggaaaaggaaaggatg
aggcaaaaaagcacctattctacctaccccaaggctgaacccacaccaatcacctcttca
gcacccccaggtggcaccctctattcctctcctgtgaactcctctgctcctctagctgag
gacatcgatcctgagttggctcgatacctgaatcgcaacttttgggaaaagaagcaggag
gaagtacgcaagagccccactccttcagccccactgtctatgggggagccagcaacccaa
actacggaagtcccacctgccccacttagtgttgtggagcagcaatatcagaatggtgag
acagacgagagccatgagcagtttttgaaagctttgcagactgcggtcaccacctttgtc
aaccgtatgaagagcaaccacctgcgagggcggagcattactaatgattcgtcagtcctt
tctgtcttccagtccatcaacagcatgcacccccagctcttggagctcctgaaccaattg
gatgagcgtcgattatattatgagggacttcaagataaacttgcccagatccgggatgca
cgtggagccctaaatgccttgagagaagagcacagagaaaaactgcgccgagctgcagaa
gaggcagagcgtcaacgtcagatccagctagctcaaaaactggagatcatgcggcagaag
aagcaggaatatctggagatgcaacggcagttagccatccagcgccttcaagagcaagaa
aaggaacgccagttacggttggagcaacagaagcaaacgatccagatgagggcacaaatg
cctgctttctccttgccgtacgcacagctgcaagccatgcctcctgccagcggagtgatc
taccaaccatcaggacccacaagcttcccaggcaccttcagcccagcaagctctgtggag
ggctcccccatgcacaccgtctacatgagccagtccgcccagggcagtacaggaccctac
actgcgatgcctgtggcaggaacagatcctggcatggtgagcacctacatgtactccaca
ggcaataacaatacacaacctgccccacaggcacaggcaaatcctgcttattcttcctat
caacccacacctacgcagggttaccagaatgcacccgccccttcccaaacgcagacagtg
cctgccatgacccaagcgcccccccagtctgggggcactatgggttacatgggcaatcag
tcaatgccaatgggataccagccctacaatatgcagaaccttatgtcaactctccctggc
caggaatcaggtctgagtagcctgccaccccagcagccttacctgtcaggacaacagcct
atgtatcaacagatggcaccctccggagggcctccacaacaacagccgcctccccagcag
acctcttcccaggtgcagcaagtgcaagggggaagtggagaggctcagcttatttccttt
gactaa
DBGET
integrated database retrieval system
