Thamnophis sirtalis (common garter snake): 106544992
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Entry
106544992 CDS
T06107
Symbol
GABRB2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04080
Neuroactive ligand-receptor interaction
tsr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106544992 (GABRB2)
04082 Neuroactive ligand signaling
106544992 (GABRB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106544992 (GABRB2)
Ion channels [BR:
tsr04040
]
Ligand-gated channels
GABA-A
106544992 (GABRB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2070
Motif
Other DBs
NCBI-GeneID:
106544992
NCBI-ProteinID:
XP_013916940
UniProt:
A0A6I9Y226
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MLRVRKKGCFGIWSLPFIITVVCAQSANDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPV
AVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDT
YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIES
YGYTTDDIEFYWRGGDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKR
NIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDMYLMSCFVFVFMALLEYALVNYIFFGRGPQRQKKAAERAASANNEKLRMDVNKI
FYKDIKQNGTELRSLDPTGNLSPTRWTATYDYPLKTDRRIIGTYHCPEMYSTKMDPHENI
LLSTLEIKNEMAASEAVIGLGDPRSTMLAYDTSSIQYRKAGLPRHSFGRNALERHVAQKK
SRLRRRASQLKINIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgctgagagtccggaaaaaaggttgctttgggatttggtcgttgccctttataataaca
gtggtttgtgcacagagtgctaatgatcctagcaatatgtccctagtaaaagaaactgtg
gatagattgctgaaaggctacgacattcgactgaggccagattttggaggtcctcctgtg
gcggttggcatgaacatagacatagccagcatagacatggtgtcagaagtcaatatggac
tatactttgaccatgtactttcaacaagcatggagggataagaggctttcatataatgta
atacctttaaaccttacactggacaatagagtagcagatcagctttgggttcctgatacc
tacttcctgaatgataagaagtcatttgtacatggtgtcaccgtgaagaacagaatgatt
cgtttacatccagatgggacagttctctatggtctcagaattacaacaacagctgcatgc
atgatggatctacgaagatatcccttagatgaacaaaactgcacattagagatagaaagc
tatggctacacaactgatgatattgaattttactggcgcgggggtgataatgcggttaca
ggagtgacaaagattgaactgccacagttctctatagtggattacaaacttatcaccaag
aaagttgttttctcaacaggttcctatcccaggttgtccctaagttttaaacttaagaga
aacattggctatttcattctgcagacttatatgccttccattctgatcacaattctgtct
tgggtatcattctggattaactatgatgcatcagctgcaagggtggctttagggattaca
acggtgctgacaatgacaaccattaatacccatctgcgagaaacactacccaaaatcccc
tatgtgaaagccatcgacatgtatctgatgagctgctttgtctttgtgttcatggctctt
ctggagtatgccttggtgaactacatcttttttgggaggggaccacagcgccagaagaaa
gcagcagaaagagctgccagtgctaacaatgagaaattacgaatggatgtcaacaagatc
ttttataaagatataaaacaaaatgggaccgaattgcgatccctggatcccactggaaat
ctctccccaactagatggactgccacttacgattaccctcttaaaacggacagaagaata
attggcacatatcattgtccagaaatgtattcaacaaagatggacccacacgagaacatt
ttgttgagcacgcttgaaattaaaaacgagatggctgcctctgaagctgttatagggctt
ggggaccctagaagcacgatgctggcctatgatacctcaagtatccagtatcggaaggct
ggtttaccaagacacagctttggccgtaatgctctggaacggcacgtggcccaaaagaaa
agccggttaaggagacgtgcttctcagttgaaaattaatatccctgacttgactgatgta
aatgccatagatcgatggtcacgcatattcttcccggtggttttttctttcttcaatatt
gtctattggctttactatgtgaactaa
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