Thamnophis sirtalis (common garter snake): 106545002
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Entry
106545002 CDS
T06107
Symbol
ATG12
Name
(RefSeq) ubiquitin-like protein ATG12
KO
K08336
ubiquitin-like protein ATG12
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04068
FoxO signaling pathway
tsr04136
Autophagy - other
tsr04140
Autophagy - animal
tsr04621
NOD-like receptor signaling pathway
tsr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
106545002 (ATG12)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106545002 (ATG12)
04136 Autophagy - other
106545002 (ATG12)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106545002 (ATG12)
04622 RIG-I-like receptor signaling pathway
106545002 (ATG12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106545002 (ATG12)
04121 Ubiquitin system [BR:
tsr04121
]
106545002 (ATG12)
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106545002 (ATG12)
Membrane trafficking [BR:
tsr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
106545002 (ATG12)
Ubiquitin system [BR:
tsr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
106545002 (ATG12)
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106545002 (ATG12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APG12
ATG8
Motif
Other DBs
NCBI-GeneID:
106545002
NCBI-ProteinID:
XP_013916915
UniProt:
A0A6I9Y8H1
LinkDB
All DBs
Position
Unknown
AA seq
174 aa
AA seq
DB search
MSDVEKGTGEGHHFRFAITMSETSEKPETLPVAAAPGCSPEEGGRGEGGEEETSENGGGG
VAAGALDATPPSALSPVAEEPTGDTKKKIDVLLKAVGDTPIMKTKKWTVERTRTIQSLID
FIKKFLKLLASEQLFIYVNQSFAPSPDQEVGTLYECFGSDGKLILHYCKTQAWG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgttgagaaagggacgggggaggggcaccacttccgctttgccatcactatg
tcggagaccagcgagaagccggagacgctgccggttgctgcggctcccggctgttctccc
gaggaagggggccgaggggaaggtggggaggaagaaacctctgaaaatggaggaggaggc
gtcgcggcgggagcgctcgacgcgactcccccctcggctctttccccggtggccgaagaa
cctacgggagacacgaagaagaaaattgatgtgttgctcaaagctgttggagatactcct
ataatgaagaccaagaaatggactgtagaaagaactcgaacaatacaaagcctaattgac
ttcatcaaaaaatttctcaaacttttggcatctgaacagctgtttatttacgtgaatcag
tcctttgctccttcaccagatcaggaggttggaacattatatgagtgttttggaagcgat
ggcaaacttatattgcattattgtaaaacccaggcctggggatga
DBGET
integrated database retrieval system
