Thamnophis sirtalis (common garter snake): 106545004
Help
Entry
106545004 CDS
T06107
Name
(RefSeq) helicase SRCAP-like
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106545004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106545004
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
106545004
SWR1 complex
106545004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HSA
ResIII
DEAD
AAA_14
AAA_22
DUF2526
Cas3_HD
Motif
Other DBs
NCBI-GeneID:
106545004
NCBI-ProteinID:
XP_013916917
UniProt:
A0A6I9XS77
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MQTSPPRQHHMLHTQVELETTSDKMTGSNPVSPASSGSPASSGSISPSHLTHDSSLDSHL
SFDGPKLQNRALVSSGMYISPDPASMWDKTHAEIAEQAKHEAEIENRIAEMKKEGFWSLK
RLSKVPEPIRPKVHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQKQKEER
AKREEQAKLRRIASSIAKEVKQFWSNVEKVVQFKQQSRLEEKRKKALDLQLDFIVGQTEK
YSDLNGDFGIFDLINLEGSVSRYETDTFLMLQPMPKPENRTVVLVNSPRPTTPLQRPITP
VLSEPLTPAIVPVPHTGPVLPGPLQPTTLPASVSLPVSIPMPPSPVTMSVPVPPPTKPQT
PTVVPTLSQNNPAATLLQSQASVPQVGQQPPPTNTLGPGPAGTTAQQSTSSIGGMVKPMN
IHSAIHTLPGYNFAAAAGGVQQRLLLSPDMQARLPSGEVVSIGQLASLANRPLQGAPGSK
PLTFQIQGNKLTLMGTQVRQVTMPQPAQQLPKEITDIAAAAESLQPKGYTLATTQVKTPI
PYLLRGTLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGSWGPH
LIIVPTSVMLNWEMEIKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHICITSYKLVLQ
DHQAFRRKNWKYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMH
FLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNENLVKRLHKVLRPFLLRRVKVDVEKQMP
KKYEHVIKCRLSKRQRYLYDDFMAQATTKETLATGHFMSVINILMQLRKVCNHPNLFDPR
PIHSPFITQGICFNTASLVLHALDYDPFKNVDFGIFDLINLEGSVSRYE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccagtcctccacgacaacaccacatgctgcacacacaggtagagttggagact
acatcagacaaaatgacaggcagcaatccagtgtcaccagcctcttcaggctcacctgcc
tcaagtgggagcatctcaccatcacatctcactcacgattcctctttggacagtcaccta
agttttgatggtcccaagttgcagaacagagccctggtatcatcagggatgtatatctcc
cctgatcctgcgagcatgtgggacaagacacatgcagagattgctgagcaggcaaaacat
gaagcagaaattgagaatcgcattgcagaaatgaagaaggaaggattctggtctttgaaa
aggctttcaaaggtgcctgagccgattcggcccaaagtgcactgggattatctttgtgag
gaaatgcagtggctctctgctgacttcgctcaagaacgtcgttggaagaggggtgttgcc
aggaaggttgtgcgcatggtgatcaggcaccacgaggaacagaagcagaaagaagaacga
gccaaacgtgaggagcaagccaagttgcgccgcattgcttcttccatcgccaaagaggtc
aagcagttctggagcaacgttgagaaggttgtgcaattcaagcagcagtcacgtcttgag
gaaaaacggaaaaaagcactggatctgcagctggattttatagtgggccagacagaaaaa
tattccgacttgaatggggacttcggcatttttgatctgatcaacttggaaggctctgtg
tcccgttatgaaacagacacattcctgatgttacagcccatgcccaagccagaaaacaga
acagtagttctggtgaacagccctcgacccacaacccctctacagagaccgataactcct
gtgctttcggaaccactgacacctgctatagttcctgtaccacacacaggcccagtattg
ccagggcctttacagcccaccacgctccctgcctcagtgtctctccctgtgtctatcccg
atgcctccttcacctgtgaccatgtcagtaccagtgccgcctcctaccaaaccacagacc
ccaactgtagtgcctactttgagccagaacaacccagctgctactctgctgcagagccag
gcctctgttcctcaggtggggcagcagcctccaccgaccaacactttgggcccaggacct
gcagggactactgctcaacaatccaccagctccattgggggcatggtgaagcccatgaac
attcattctgctatacataccttgcctggatacaactttgcagcagcagctggaggtgtg
cagcaaaggcttttgctgtccccggatatgcaggcacgattgccttcaggtgaagtggtc
agcattgggcaacttgcctcgttggctaatcggccactccaaggtgccccaggcagtaaa
cccctcacattccagatccaaggcaacaagcttaccttgatgggtacccaagttcgccag
gtcactatgcctcagccagcccaacagctgccaaaagagatcacagacattgcagcagca
gccgagagcctgcagccaaaaggctataccttggcaaccacacaggttaagacaccaatc
ccctatttgttgcgtggaacgctgcgagaataccagcatattggtctcgattggctggtt
actatgtatgaaaagaagctcaacggtatcctggctgatgagatgggtcttggtaaaacc
atccagacaatttccttgctggcgcatctggcctgtgaaaaaggcagttggggtcctcat
ttgatcattgttcctaccagtgtgatgctcaactgggagatggaaatcaagcgctggtgt
cccagtttcaagattttaacatattatggggcacagaaggagcgtaagctgaagcgacag
ggttggaccaagcccaatgccttccatatctgcatcacctcctacaagttggtgttgcag
gatcaccaggcctttcgacgcaagaattggaaatatctgatcttggatgaggctcagaac
atcaagaacttcaaatcccaacgctggcaatctttgctcaacttcaacagccagaggcgg
ctactgctgactgggacacctctccagaacagcttaatggagttgtggtccctcatgcac
tttctgatgccacacgtcttccagtcacaccgtgaattcaaggagtggttttctaacccc
ctgacaggaatgatcgaaggcagccaggagtacaatgagaatttagtcaaaagactgcac
aaggtgttgcgtcccttcctcttgcgaagggtaaaagtagatgtagagaagcaaatgcca
aagaaatatgagcatgtcatcaagtgccgtctttccaagcgccaacgttatctttatgat
gacttcatggcccaggctaccaccaaggagacgttggctacagggcatttcatgagtgtc
atcaacatcttgatgcaactccgcaaagtctgcaatcaccccaatctttttgacccccgg
ccgatccactcgccatttatcacacagggcatctgcttcaacaccgcctccctcgtcttg
catgctcttgattatgatcctttcaagaatgtggacttcggcatttttgatctgatcaac
ttggaaggctctgtgtcccgttatgaa
DBGET
integrated database retrieval system
