Thamnophis sirtalis (common garter snake): 106545088
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Entry
106545088 CDS
T06107
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106545088 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106545088 (MLH3)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
106545088 (MLH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Poty_PP
Sde2_N_Ubi_yeast
Motif
Other DBs
NCBI-GeneID:
106545088
NCBI-ProteinID:
XP_013917024
UniProt:
A0A6I9XMA4
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MIRCLPEEVQTSLRSGVAINSVGHCVEELILNSIDAKATCIAIRVDLETFKVQVVDNGCG
MGREDLNNVGNRYFTSKCYSLEDLENLKFYGFRGEALASIASMASILEILSRTSRTAKTF
LKLFHNGKGLEVSEAELNRPSLGTTVTVYNLYHQLPVRRKCMNFTLEFERLRHKVEALSL
VHPSVSFSLRNEAFCSMVLQLPKTKDMCTRFSQIYGLGKSQKLREINYRSAGFEIMGFIS
SEGHYNKNIQFLYVNNRLILKTKLHKLIAFLLRKQSVICKTKTGSLLSSPVRHRSGSELH
GVFIINVKCQHDEYDICLEPAKTLIEFRRWNALLTCLEEGVKAFLKQEHLFIELCGEDIT
DFNENNDFCLGNPTALQSSLPKEKNIQETFKSACDNIVESYETFNLQSKSVRRKATLTKK
IQDNIQPINNVKEVGVYSDVTGFESVHELRSNKDKYLLPNKKDINSDFLKFSKYPEESEL
HIDVMSSKWPEELGIQDKISETDQHSDTLLCTENHGKKDANSQQDTVIQERSPDLGNMGC
NENEKHDECKSKYIFGHSMMGKCKLGKKGRESFTDLNIARGLMVEQDPLKLGSENITAYL
PQNQPSYKTIESSNLLNRQAKLGPVTAKDIFEKQLEFSEQIPSSLENMTKTNIIHIGNTK
EWLKKKSTSASLPADSTVHSVISHVKEYMPVVPADSVIHLDDINSRRQINDISVRAQYCD
STKLSCHSKLGSLDRFRKYYGNLKRNASIKDTEIRNSDEAAVCSGSMAGDRTDLQNICET
VTKEYIESNNNNGCNSLLPLEKSQHSPEENLSIRKAFSSNTITEYSQKVRKSLSGSNCTR
TLASKVSRMKECDKDVISMQPIDKSSAQTEVCSDPTDKNIQHLTSITHLQSTYKKSQHCP
SIREEEEESNCFASASDKQGNSMGARADMEGTVSHCFIDTDGEYTISQNRHSVLYNKVDT
DSSCEDASIEGEFTKQAAKCNELQSINMPGNMEKNTEDSCMSEKPKFSPSKWFYKFDVSL
GRMVFINKMSGLSSYRAPPEETSVACTQDLSTIAVNVIEKGFQCRCHPFRSEVIVPFLPK
AQKERSLESQDYRDAQGESLQGLLSEWDNPVFAQCPEVALDVSSGQADTLAVKIHNILYP
YRFTKKMIDSLQVLNQVDNKFIACLINTREDESEHADGNLLVLVDQHAAHERVRLEQLIT
DSYDKQHEALGKKKLLASTLCPPLEIEVTEDQRRLLWCCHKNLENLGLELLFPKNNLSQI
LVGKVPLCFVEKEANELRRGRHTVTKRIVQELIQEQIELLQTTGGVQATLPLTILKVLAS
QACHGAIKFNDSLTFDESCHLMASLSCCQLPFQCAHGRPSMLPLADVDHLQQENKPKPNL
AKLRKMVKAWKLFGKEKESTVNVEASAVQ
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatgcttgcctgaagaagtacaaaccagtttgcgctctggagtggccattaat
tcagtcggacattgtgttgaggagcttatccttaatagcatagatgcaaaggctacatgt
attgctattagagtggatttggaaacctttaaggtccaggtggtggacaatggctgtggg
atgggaagagaagatctcaacaatgtaggcaatagatactttactagtaaatgttattca
ttggaagacttagaaaatctgaagttttatggcttccgtggagaggctttggcaagtatt
gcaagtatggccagtatattggaaatattatccaggacaagtaggacagcaaaaacattc
ttgaaactgtttcacaatggaaaaggtcttgaagtctcagaagcagaactgaataggcca
agtcttggaacaacagtgactgtatacaatttgtaccaccagttacctgtgaggagaaag
tgcatgaatttcacactggaatttgagaggctgagacataaagtagaagctctttcactt
gttcatccatcagtttctttttctttacggaatgaagctttctgttcaatggtgcttcag
ctacccaaaacaaaagatatgtgcacacgtttttctcagatttatggtctaggtaaatct
cagaaattacgggaaataaattataggtctgcaggatttgaaataatgggctttatcagt
tcagaaggacattacaataagaatattcagtttttgtatgtaaataatagattgatatta
aaaacaaaattacataagcttattgcttttctgttgaggaaacagagtgttatatgtaaa
acaaaaactggatctttgctctcaagtcctgtccgccatcgttctggctcagaactccat
ggtgtgtttattatcaatgtgaagtgtcagcatgatgaatatgatatatgtttggaacct
gcaaaaactttaatagaatttcgcagatggaatgctcttctaacctgccttgaagaagga
gtaaaggcatttttaaaacaagaacatctatttattgagttgtgtggtgaagatattaca
gactttaatgaaaataatgatttttgtttgggtaacccaacagctttacaatcttctctc
cccaaagagaagaatattcaggagacctttaagtcagcatgtgataatattgtagaatct
tacgaaacttttaatctgcagtcaaaatctgttagaaggaaagcaactctgacaaagaag
atacaagataatatacaacctattaacaatgtgaaagaagtaggtgtttactcagatgta
actggttttgaatctgttcatgaattgagaagtaataaagataagtatcttttgcccaat
aaaaaagacattaattctgattttctaaaattcagtaaataccccgaagagtcagaatta
cacattgatgttatgagttccaaatggccagaagaacttggcatccaagacaagatttcg
gaaacagaccagcattctgatactttgctttgtactgagaaccatgggaagaaagatgca
aatagtcaacaagatacagtgatccaggaaagaagccctgatttgggcaatatgggatgt
aatgaaaatgaaaaacatgatgaatgtaaaagtaaatatatttttggacatagcatgatg
ggaaaatgcaaattgggaaaaaagggcagagaatcctttactgacttaaatattgctaga
ggattgatggtagaacaagatcctttgaaactgggttctgaaaacattacagcatattta
cctcaaaatcagccatcatataaaacaatagaatctagtaatttattaaacagacaggct
aaactgggtccagtaactgccaaggatatctttgaaaaacagctagaattttcagagcag
attccaagttctctagaaaatatgacaaaaaccaatatcatacatataggaaatacaaag
gaatggctaaagaaaaagagtacatcagcctcacttcctgcagatagtactgtgcattct
gtaatatcacatgtgaaagaatatatgcctgtggtgcctgcagattcagttatccatcta
gatgatataaacagcaggaggcaaataaatgacatttctgttagggctcaatattgtgat
tcaacaaaattaagttgccattcaaaacttggatcactagataggttcagaaaatattat
gggaatttaaaaaggaatgcatcaataaaagatacagaaataagaaatagtgatgaagca
gcagtctgttctggatctatggctggtgatagaacagatctacagaatatttgtgaaact
gtaacaaaagaatatattgaatctaataataataatggctgtaatagcctccttccctta
gaaaagtctcaacattccccagaagaaaatctatcaatcagaaaagcttttagttcaaat
accattacagaatattctcaaaaagtaaggaaatctctatctggatctaattgcacaagg
acactcgcctctaaagtgtcaagaatgaaagaatgtgataaggatgttataagtatgcaa
cccatagataaatcttcagctcaaactgaagtgtgttcagaccccacagataaaaatata
cagcatctcacatctataactcatttgcaaagtacctataaaaaatctcaacattgtcct
tccataagagaggaggaggaagaaagtaattgttttgcttcagcctctgataaacaaggt
aattccatgggtgcaagagcagatatggaaggaactgtcagtcattgtttcattgacact
gatggagaatacacaatctcccaaaatagacactcagttctgtataacaaagtggatact
gacagttcttgtgaagatgcaagcattgagggtgaatttacaaagcaagctgcgaaatgt
aatgagctccaaagtataaacatgcctggaaatatggaaaagaacacagaagattcatgt
atgagtgagaaaccaaaattcagtccctctaagtggttttataagtttgatgtgtcattg
ggcagaatggtattcatcaacaaaatgagtgggctgagttcctatagagctcctcctgaa
gaaacttcggtagcttgtactcaggatctaagcacaatagctgtaaatgtcatagagaaa
gggtttcagtgcaggtgccatccctttcgaagtgaagttattgtgcccttccttccaaaa
gcacagaaagagaggagtttggaaagtcaggattatagagatgcacaaggagaatctctt
cagggcttactttcagagtgggacaatcctgtgtttgctcaatgtccagaggttgctctg
gatgttagcagtgggcaggcagatacccttgctgttaaaatacataacatcctctatcct
tatcggttcactaaaaagatgattgattctctgcaggtccttaatcaagtggacaataaa
tttattgcatgtttaatcaacactagggaagatgagagtgaacatgcagatgggaatctt
cttgtacttgtggatcagcatgcagcccatgaacgtgtccgtcttgagcaacttatcaca
gattcctatgacaagcaacatgaagcactgggcaagaagaaattattggcttccactttg
tgtcccccattggagattgaagtaacagaggatcagagaagactcttatggtgctgtcat
aaaaatctggagaatttaggtcttgaattgctgtttcccaaaaacaatctctctcagatt
cttgttggaaaagtgccactgtgttttgtggagaaagaagctaatgaattgcgtcgtggg
aggcatactgtgactaagagaattgtgcaggagcttattcaagaacaaattgagttactt
cagacaactggtggggtacaagcgacattaccattaaccattctgaaagtgctagcttcc
caggcctgccatggcgctattaaattcaacgacagcttgacttttgatgaaagttgccat
cttatggcttctttgtcatgttgtcaactgcctttccagtgtgctcatgggagaccttcc
atgttgcctcttgcagatgtggatcatttgcagcaggaaaataagccaaaacctaatctc
gccaaattaagaaaaatggttaaagcctggaagctctttggaaaagaaaaagaatctact
gtgaacgttgaagcctcagcagttcaatga
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