Thamnophis sirtalis (common garter snake): 106545101
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Entry
106545101 CDS
T06107
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106545101 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106545101 (USP38)
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106545101 (USP38)
Peptidases and inhibitors [BR:
tsr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106545101 (USP38)
Ubiquitin system [BR:
tsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106545101 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
FCD
Motif
Other DBs
NCBI-GeneID:
106545101
NCBI-ProteinID:
XP_013917041
UniProt:
A0A6I9XTG0
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MEKILEGLVSSSYPLPVKRMIVKRVVESAESPLSGPQCQAMFALSTRLILQGPDQFQRQV
GRQVLEAYALHHRDDFEAFFTRDLVLALLHGAGGGGSPASPLFLAPAPLPAPGLGSHLDP
GVLDYIQTGLRLLISCPAVLELFALLQREALRLVSERPPAPLCARLCQLLSDFPQCLPRG
RKLALVFCQQLVRSIAHFQTQSTREAALRLYVSQVTQVSNLLRGIWKAEPDTLLPSLQEL
FAIISSTDTSEPSVALASLVQHIPLQMITVLIGSLTTDPNVKDASMTQALCRMIDWLSWP
LAQHVETWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSF
QHSPEAFHLIVPHVVKLVTSVKSNGLPTSTTFLQQLSELMHCMMYHYSGFPELYEPILEA
IKELFKPNEEKIKIILNQSAWTSQSSSLQSCLSRFSGKSETGKTGLINLGNTCYMNSVIQ
ALFMATDFRRHVLSLNLNGCNSLMRKLQHLFAFLAHTQRDAYAPRLFFEASRPPWFTSRS
QQDCSEYLRFLLDRLHEEERTLKVLSSSKLPEDMNEESLVQEVASKSQLFIKQSCSMKEE
RTLIEKMFRGKLQTSICCLNCKSTSHKEEAFTDLSLAFCPPVFFKNVGPPTVEHSSDEKD
DSMEQVSARALSPVTEMPSGDSCEMVTNDGTLKDAPTDSNSENVTDPFICKTEVGDNLKK
HVNEVTPSVTDLLNYFLAPEVLKGDNKYFCEKCASLQNAEKIMQIVEEPEYLILTLLRFS
YDPKCHIRRKILDNVSLPLVLELPVNRTLSSLSTLSGIWSMSVEFSDTGENLAKKLKPSG
AEEVGCPQLIPYVLSSVVVHSGISSESGHYYSYARNVANSRSSLGSFDQSQTMALAYPQS
NLTAATEKDLDENEVSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLFYKKQNSAGT
ISAKSASGLWINGDPPLQKELMDAITKDNKLYLQEQELSARTQALEASAASCSFRPNGFD
DNDPPGSCGPTGGGGGGGFSTVGRLVF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatcttggaagggttggtgagctcgtcctacccgctgccggtgaaacgtatg
atcgtcaagcgcgtggtggagtcggccgagtcgccgctgagcgggccgcagtgtcaggcc
atgttcgccctcagcacccgcctcatcctgcagggccccgaccagttccagcgccaggtc
gggcggcaggtcctcgaggcctacgctcttcaccaccgcgacgacttcgaggccttcttc
acgcgcgacctggtcctggctttgcttcacggggcaggaggaggaggaagccccgcgtcc
cctctcttcctcgcccctgctccgttgcccgcgcccggccttggctcccacttggacccc
ggcgtcttagactacatccagaccggcctgcggcttctcattagctgcccggcggtgctg
gagctgttcgctctgctgcaaagggaagcgttgcgcctggtgagcgagaggcctccggct
cctctttgcgctcgcctttgccagctgctgagcgactttcctcagtgtctgccccgcggt
aggaaactcgccctcgtcttttgccagcagttggtacgcagcattgctcacttccagacc
caaagcacccgggaagctgctctacgcctctatgtctcccaagtcacccaagtcagcaat
ctgctgcgcggcatctggaaagcggaacccgatacgctgctgccttccttgcaggagctc
tttgccatcatctcttccaccgatacttctgaaccttcggttgctttggcaagtcttgtg
cagcatatccctttacaaatgattacagtcctgattggaagccttaccacagatccaaat
gtaaaagatgcaagtatgacacaagctttatgcaggatgattgactggttgtcctggcca
ttagctcagcatgtagagacctgggtgatagcattactgaaaggactggctgcagttcag
aagtttactatccttattgatgttactttgcttaagattgaattggtatttaatcgcctt
tggtttccactggtgagacctggtgctttggctgtcctttctcatatgctgctcagtttt
caacattctccagaggcttttcacttgattgttccacatgtggttaaattggtaacatcg
gtcaaaagtaatggtctgcctaccagcacaacattcttacaacagctgagtgaattaatg
cactgtatgatgtaccattactctggattcccagaactttatgaacccattctagaagca
ataaaggagcttttcaaacccaatgaagaaaaaattaagataatactgaatcagagtgcc
tggacatctcagtccagctccttgcaatcttgtctgtctagattttctggaaaatctgaa
actggaaagactggtctgattaatttaggaaatacttgttacatgaacagtgtgattcaa
gcattattcatggctacagatttcagaagacatgtgttatcattaaatctaaatgggtgc
aattcactaatgagaaaattgcaacatctttttgcatttcttgctcatacacagagggat
gcctatgctcctcgccttttctttgaggcatctaggcctccgtggtttacttctagatct
cagcaggactgctctgaatatcttaggttccttctagacaggctacatgaagaagagaga
accttgaaagttctgtcttcatcaaagcttcctgaggatatgaatgaagagtccctggtc
caagaagtagccagcaaatctcaactatttatcaagcagtcatgttcaatgaaagaggag
agaaccttgatagaaaaaatgtttcgagggaaactacaaacaagcatatgctgtttaaat
tgcaaaagtacttctcataaagaagaagccttcacagatctttcacttgctttttgtccg
ccagtattctttaaaaacgttggtccaccaactgtagaacattcgtctgatgagaaagat
gactccatggaacaagtcagtgctagggcattgagccctgtgacagagatgccatccggt
gattcctgtgaaatggtcacaaacgatgggactttgaaagatgcccccactgactcaaat
tctgaaaatgttactgatccttttatctgtaagactgaagttggggataacttgaagaaa
cacgtcaatgaagttactccttcagttactgatttgttaaattattttttggcacctgaa
gttcttaaaggggataacaaatacttttgtgaaaaatgtgcttccttacaaaatgcagaa
aaaattatgcaaattgtggaggagccagaatacctcatccttactcttttgagattttca
tatgatcccaagtgtcatattaggcgtaaaatcctagacaatgtgtctcttccgcttgtt
ctagaattacctgttaatagaactctctcatccttaagtacattgtcaggcatttggtct
atgagtgttgagttttctgacacgggggagaatttggctaaaaaactaaagccttctggt
gctgaagaagttggctgccctcaactaatcccttatgtattaagttctgtagttgttcac
tctggcatatcttctgaaagtggacattattattcttatgcaagaaatgttgctaattca
aggtcttcgctaggatcttttgatcagtcccaaactatggctttagcttatcctcagagc
aatttaactgcagctactgaaaaggatctggatgaaaatgaagtctcaaaggaatggttt
ctatttaatgacagcagagtgacattcacctcatttcaatcagtccaaaaaattacaagc
agattccccaaagatactgcttatgtgctgttttacaaaaaacaaaacagtgctgggact
atcagtgcaaaatcagccagtggactctggatcaacggagatccccctctgcagaaagaa
cttatggatgcaattacaaaagacaataagctgtatttgcaggaacaagagcttagtgct
cgaacccaggccctagaagcatctgcagcttcgtgttcttttcggccaaatggatttgat
gacaatgatcccccagggagttgtggtccaaccggtggaggtggtgggggaggatttagt
actgttggcaggcttgtattttaa
DBGET
integrated database retrieval system
