Thamnophis sirtalis (common garter snake): 106545120
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Entry
106545120 CDS
T06107
Name
(RefSeq) heat shock cognate 71 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03040
Spliceosome
tsr04010
MAPK signaling pathway
tsr04141
Protein processing in endoplasmic reticulum
tsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106545120
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106545120
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106545120
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106545120
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsr01009
]
106545120
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106545120
03009 Ribosome biogenesis [BR:
tsr03009
]
106545120
03110 Chaperones and folding catalysts [BR:
tsr03110
]
106545120
04131 Membrane trafficking [BR:
tsr04131
]
106545120
03051 Proteasome [BR:
tsr03051
]
106545120
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106545120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106545120
Protein phosphatases and associated proteins [BR:
tsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
106545120
Spliceosome [BR:
tsr03041
]
Complex B
Other components
Prp19 complex
106545120
Complex C
Prp19-CDC5 complex
106545120
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
106545120
Chaperones and folding catalysts [BR:
tsr03110
]
Heat shock proteins
HSP70 / DNAK
106545120
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
106545120
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
106545120
Proteasome [BR:
tsr03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
106545120
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
106545120
Exosome [BR:
tsr04147
]
Exosomal proteins
Proteins found in most exosomes
106545120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
FGGY_C
Hydantoinase_A
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
106545120
NCBI-ProteinID:
XP_013917057
UniProt:
A0A6I9XSK1
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
MNPTNTVFDAKRLIGRRFDDPVVHSDMKHWPFQVINDGGRPKVQVEYKGEMKSFYPEEVS
SMVLTKMKEIAEAYLGKTINNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA
IAYGLDKKVGGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
FVSEFKRKHKKDITDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
RFEELNADLFRGTLEPVEKALRDAKLDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGRELN
KSINPDEAVAYGAAVQAAILCGDKSENVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKGRLSKEEIERMVQEAEQYKAEDEVQREKIAAKN
SLESLAFNMKSTAEDEKLKDKLSPEDKQKILDKCNEVISWLDRNQMAEKDEYEHQQKELQ
NVCNPIITKLYQGAGGMPGGMPGGMPGGFPGAGGAGGGSSGPTIEEVD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagggtccagctgtcggcattgatttggggaccacctactcctgcgtaggcgtt
ttccagcatggcaaggtggagatcatcgccaacgaccagggcaaccgcaccacgcccagc
tacgtggctttcacggacacggagcgcctcattggtgatgctgccaagaaccaagtggcc
atgaatcccaccaacaccgtctttgatgccaagcgcctaattggccgacgtttcgacgat
ccggtcgtacacagcgacatgaagcactggcctttccaagtcatcaatgatggcggtcgc
cccaaagtccaagtagaatataagggcgagatgaagtccttctaccctgaagaggtctcc
tcaatggtgctgaccaagatgaaggagattgcagaggcttacctgggcaagacaattaac
aatgcggtaatcacggtcccagcctatttcaatgactctcagcggcaagccaccaaagac
gccggcaccatctcgggcctcaatgttcttcgcatcatcaacgaaccgacggcagcagcc
attgcctatgggctggataaaaaggtgggtggcgagcgcaacgtcctcatttttgacctg
ggcggtggcacctttgatgtgtccattctgacgattgaggatggcatctttgaagtgaaa
tcgacggctggagacactcacctgggcggtgaggattttgacaatcgcatggtgaaccac
ttcgtgtcggagttcaagcgcaagcacaagaaggacatcacggacaataagcgggccgtc
cggcggctgcgcacagcttgcgagcgggccaagcgcacgctcagctcctccacccaggct
tccattgaaattgactccctctacgagggcattgacttctacacttccatcacccgggct
cgctttgaggagctgaatgccgacctcttccggggcaccctggagccggtggagaaggcc
ttgcgggatgccaagttggacaaggcccaggtccacgacattgtgctggtggggggctcc
acccgcattcccaagatccagaagcttttgcaggacttcttcaacggccgggagctcaac
aagagcatcaacccagacgaagcggtggcgtatggagcagctgtccaggctgccatcttg
tgcggggacaagtctgaaaacgtgcaagatcttctacttttggacgtcacccctctttcc
ctgggtattgagaccgcagggggggtgatgacagccctcattaagcgaaacaccaccatc
cccaccaaacagacccagaccttcaccacttactctgacaaccagcctggagtgcttatt
caggtgtacgagggtgagcgtgccatgaccaaagataataatttgctgggcaagtttgag
ttgacgggcatcccgcctgctcctcggggcgttccccagatcgaagtgacctttgacatc
gatgccaacggtatcctcaacgtgtccgcggtggacaagagcacgggcaaggagaacaag
atcaccatcaccaacgataaaggccgtcttagcaaagaggagattgagcgtatggtccaa
gaagcagaacagtacaaagctgaggacgaggtccagagggagaagatagctgcaaagaac
tccttggagtctttggccttcaacatgaagagcacagcagaagacgagaagctgaaggac
aagttgtctcccgaggacaagcagaagatcctggataaatgcaatgaggtcatttcctgg
ctggacaggaaccagatggcagagaaggacgaatacgagcatcagcagaaagagctccag
aatgtttgcaatcccatcatcaccaagctgtaccaaggagccggagggatgcccggtggc
atgccgggtggaatgccagggggcttccccggagctggaggcgccgggggtggctcttct
ggtcccaccatcgaggaggtggattaa
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integrated database retrieval system
