Thamnophis sirtalis (common garter snake): 106545159
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Entry
106545159 CDS
T06107
Symbol
NLRC3
Name
(RefSeq) protein NLRC3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tsr04054
]
106545159 (NLRC3)
Pattern recognition receptors [BR:
tsr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106545159 (NLRC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
FISNA
AAA_16
Motif
Other DBs
NCBI-GeneID:
106545159
NCBI-ProteinID:
XP_013917095
UniProt:
A0A6I9Y8K7
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MVQKHTEGLQTWCGTNPELIPLERVTDLLLVEGLSDLQQKQHDFIQIETTNGLRNISKKI
SLEKLFLPLSKLSRPPRVSMTIGVAGIGKSTLVKLFVHAWAKREISKKFTFVLPLTFREL
NAYEKLSAEKLVRLAAPHLMDLSLLPVSSARVLLILDGLDEFKTLLDFSNAAVCTDPQKE
IQVDNLLTNIIRGHLLQKMSIWITSRPTATSQIPGGLVDRLTEMQGFGETEIKNYLGHMF
GENQSLADGVMQHLKSNKSLYALCTVPAFCCICGSSMGYFLTSAADRPPETSAIPKTLSE
IYSYYLKILLCTDWQGKQKEVLRIEPMVNNGKKMMNGLGRLAFYSLIKRKYMFVEQDMKA
YGVDLSSLHFSLSSRVLLKEETPFSSIYYFSHLTFQEYLAATYYYSVAKRALFDLFVESG
MSWPKLGFVNHVKNAIQRSLQSEDGHLDIFIRFLVGLLSSPVNKVLSDWFLVRDEHHSYQ
SHVVGLFQNFLAVDQVVSCRTVNLVRCLHELQYTEIAANIEEAMKTENLAGMLTPMNCSA
LAYVLQTSEACVEEANLSNCLTYHILQSLLSQLLYCRSLRLDCNQLKDRDMDLLSSMLSV
KDCQIQRISLAENQIGTKGAKALAKSLKVNRSLLALDLRSNAIGPNGAKALADALKNNQH
LLSLNLQSNMIKDKGAAGLAEVLASNQTLTTLHIQKNEVGPQGSKQLAEALKRNWGLKDL
NLSGNCVGDLGAAALAEGLRLNHTLLTLDLQSNSVSDTGVTALTRALCCNQGLTSLNLRE
NSISQEGAQAIAHALRTNCTLKNLDLAANLLHDEGIHAIAQALKENQALTSLHLQWNFIQ
AKAAKALNLALQCNRSLTILDLQENAIGDEGTVALASALRVNSTLEALYLQVAAIGVSGA
TALAEALVVNKNLAILDLRGNSIGLMGAKAMAHSLKVNSTLRRLNLQENSLGMDGAICIA
TALTGRHNLTYINLLGNKIGESGAKVISEAIRAKTPSCVVEI
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaaagcacactgagggtcttcagacctggtgtggcactaatccagaacttatc
cctttggagagggtgaccgatctcctcctcgtggaagggctgagcgatctccagcagaag
caacatgatttcatccagatcgaaaccaccaacggcttgaggaacatctccaaaaagatc
tccctagagaagctcttcctgcctctctccaaactcagcaggcctccacgggtctcgatg
acaattggtgtggcggggatcggcaagagcaccctggtcaaattatttgtccacgcttgg
gccaagagagagataagcaaaaaattcacgtttgttttgcctctcacctttcgggaactg
aacgcttacgaaaagctctcggccgagaagctggtcaggctggcagccccccacttaatg
gacctcagccttcttcccgtgagcagtgccagagtccttttaatcctggatggactagac
gaattcaagaccctcctggatttttccaatgcagcggtttgcacggacccccagaaggag
atccaagtggacaacctactcaccaacatcatccgaggccacctgttgcaaaagatgtcc
atctggattacttcccggccaacggcaaccagccaaatcccggggggtctggtggaccgg
ttgactgagatgcaaggtttcggagagactgaaataaaaaactatttaggtcacatgttt
ggtgaaaaccaaagcttagcggacggtgtgatgcaacatctcaaaagcaacaagtccttg
tatgccctctgcactgtgccagcgttttgctgcatctgcggctcgtcgatgggctatttc
ctaacaagtgctgctgatcggcctccagaaacttcagccatccctaagacgttgtcagaa
atctattcctattaccttaaaatattgctgtgcactgattggcaagggaaacagaaggaa
gtcctccggattgaaccaatggtgaacaatggcaagaagatgatgaatgggctggggcga
ttggccttctacagtctgatcaagagaaagtacatgtttgttgagcaggacatgaaagct
tatggagttgacctctcttcccttcacttcagcttatccagtagggtcctgcttaaggaa
gagaccccattttctagcatctactatttctcccacttaacgtttcaggaatatctagcg
gctacttattattattccgtggccaagcgtgccctctttgacctctttgttgaaagtggc
atgtcttggcccaagctgggctttgtcaaccatgttaaaaatgccatccagagatcctta
caatccgaggatgggcacctggacatttttatacgcttccttgttggtctcctttcctcg
ccggtaaacaaagtcttgtccgattggttcctggtgagggacgaacaccacagctaccag
agtcatgtggtgggcctcttccagaatttcctggccgtggaccaagttgtctcctgcagg
actgtgaacctcgtgcggtgcttacacgagcttcaatacacagagatagctgccaacatt
gaggaggccatgaaaaccgagaacctagctggaatgttgaccccaatgaattgctccgcc
ttggcttacgttctccagacatcagaggcgtgtgtggaagaagccaatctctccaattgt
ctcacttatcacatcttgcaaagtcttctctcccagctgctttactgtcgcagtctcagg
ttggattgcaaccagttgaaggaccgtgacatggaccttctcagcagcatgctgagtgtt
aaagactgtcaaattcagagaatcagcttagcagaaaaccagattggtactaaaggagcc
aaagctctggctaaatccctgaaggtcaacaggagccttttagctctggatctccggagc
aacgccatcgggcccaacggagcgaaggcgctggctgacgccttgaaaaacaaccaacac
ttgctttccctaaacctccaaagcaacatgatcaaggacaaaggagcagcaggcctggcc
gaggtgctcgccagcaaccaaacactgacgacgctgcacatccagaagaacgaggtagga
ccgcaaggctcaaagcagctggccgaagccctgaagaggaactgggggctcaaggacctc
aatttgtcgggaaattgtgttggtgacctgggtgcggcggctttggctgaaggactaagg
ttgaatcacacccttctaaccttggacctccagagcaattctgtcagcgacaccggagtg
acagcgctcacacgggctctctgctgcaaccaaggtctcaccagcctcaatctgcgggaa
aactccataagccaagagggagcgcaagccattgcccatgctctgaggactaattgtacc
ctgaagaatctggacttggcagccaacttgcttcatgacgaggggatccacgccattgcc
caggcgctgaaggagaaccaagccctcacttctctgcacttgcagtggaatttcatccag
gccaaagctgctaaggccctgaatctagctttgcaatgcaacaggagcctgaccatcttg
gatttgcaagaaaatgccattggggatgaaggaacggttgctttggcctctgccctacgg
gtgaactcaacgctggaagctctttacctgcaggtggcggcaatcggggtgagtggagcc
acagccttggctgaagcattggtcgttaacaagaaccttgccatcttggaccttagagga
aactccattggtttgatgggagccaaggccatggcccactccttgaaagttaacagcacc
ctccgcaggttgaacctccaggagaactccttgggcatggatggggcgatctgcattgcc
acggcactgacaggaagacacaacctcacctacatcaacttactgggaaataaaatcggc
gagtcgggagcgaaggtgatttccgaggccatccgagcaaaaacccctagctgcgtggtg
gagatataa
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