Thamnophis sirtalis (common garter snake): 106545164
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Entry
106545164 CDS
T06107
Symbol
SPTB
Name
(RefSeq) spectrin beta chain, erythrocytic isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106545164 (SPTB)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106545164 (SPTB)
Intermediate filaments
Intermediate filament-binding proteins
106545164 (SPTB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SKA2
PH_11
DYH2-5-8_CC
Mobilization_B
Motif
Other DBs
NCBI-GeneID:
106545164
NCBI-ProteinID:
XP_013917103
UniProt:
A0A6I9Y241
LinkDB
All DBs
Position
Unknown
AA seq
2354 aa
AA seq
DB search
MTSATDFDHLEIQPQYNRINARWEASDDELDNDNSSARLFERSRIKALADEREGVQKKTF
TKWVNSHLARVTCRISDLYMDLRDGRMLIKLLEVLSGELLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIIVQTQEGRETRSAKDALL
LWCQMKTTGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFEKLKHSNARHNLEHAFSV
AERQLGITQLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVMDHAIET
EKMIEKYSGLASDLLMWIEQTITNLNSRKFANSLAGVQQQLQYFSTYRTVEKPPKFQEKG
NLEVLLFTIQSRMRANNQKVYTPHEGKLVSDINRAWEKLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVAQDNFGNDLPAVEAAKKKHEAIETDTAAYKERVQT
IEEVAKELEVENYHDIKRINARKDSILRLWEYLLELLQARRQRLEMNLTLQQLFQDMLHS
IDWIEEMKVKLLSPETGKHLLEAEDLLQKHKLMEADMAIQAEKIHAVNAAALKFANGDGY
QPCDPKIICDRVNLLELYYQELIALAAKRKARLHQSKRQWKFFWELDEAESWIREKEQIY
SSLDYGKDLTSILILQRKHKAFEDELRGLGAHLKQTIKEGENMIAEKHFGASKICSRIEE
VKALWSQLQELAAFRKKNLHDAESFFQFQVDADDLMAWLQDANRLVSSNDVGHDEYSTQA
LVKKHRDLLDEVANNKKIMDNLYRQAQSFPAEFRDVPGFDNRLKAIQTMYNEVVSLADLR
RQKLQDALDLYTILSETDACELWMSEKEKWLEHMEIPDTLEDLDVVQHRFDILEQEINSL
ASQIEGVNRAASTLIESGHPRSGKVRQCQEHLNARWKVFQEMVAQRRKAVDFALSLHNYC
VDCEETRKWILEKTKVIESTQDLGKNLAGMIAMQRKLYGIERDLAAIQARLAVLQKEAHR
LAEEQPDLADDIFSRLTAVSGVWLDLQNTLQSQEASLGEASKLHKFLQDLDDFQAWLFKA
QKAVASEEVPNSLVEAEHLLQHHAAIKEEIDQHKDVYSNVKKIGDRVTQGQTDTEYRQLE
QRLEGMETGWNALCKMWDSREKFLNQCLGFQEFLKDAKQAEIILTNQEYTLAHTEPPDTL
EASEAVIRKFEDFLGNMAANEEKVTGLIDTGSKLAADGNIYSDKIIEKVQLIQKRHRTNV
TKSQEAFVLLKDNNDLQNFLQNCQELTMWIEEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNQGWLEKLDEEGQQLAKQKPKYADIVSQKLEALHQRWDMLQATTEEKAQQLFDANR
SDLYAQSYADLSAWISEIEEKLNSDVQGKDLTSVNILLKNLKHLDEQVSLRKKEMEGLLS
QGPPVKRDMDEVDSKHEIIERRFQDLAEPLGRKRKELEMAKAGYQLDRDLADELLWVQER
LPLAQSTDHGTNLLSVQLLTKKNQTLQKEIIGHAPRIEEVVDRGESMLAKAEGDGDFRDT
EECLNQLKVSWSTLQEETLKRLRRLEEASEAQRYYLDAGEAEAWISEQELYVGTDEKPKD
EESGIVMLKRHLRQQRSIEEYGKNIKQLASRAQKLLSAGHPEGEDIIRLQGQVDKQYAGL
KDLAEERRRKVELAYHLFKLKREVDDLEQWIAERDVIASSPEMGQDLDHATLLREKFRDF
ARETGTLGQEWVNNVTHRTDQLIDIHPEAATIAEWRDGLNESWADLLELIDTRMQLLTAS
YDLHKFFYDGSEIQVLIEEKHKELPEELGRDVNTAESFHRMHKAFERDIHLLGVQVQHFQ
EVAARLLAAYAGEKAMAIQKQEQEVVKAWKALLEACEGRRAQLVDTAEKFRFFCMVRDLM
SWMESVIRQIDTQEKPRDVSSVELLMKYHQDIKSEIATRDKSFTACIDLGKTLLQRKLHD
AAEIKEKLLQLTEKRREMMEKWDRRWDWLRLLLEVCQFSRDASVAEAWLVAQEPYLFSGD
YGQTVEGVEKLLKRHEAFEKSTATWEERFAALERLTTLELLRKRKISEESSQHKIAKTTD
LEFDFELEPECEIRPVEKDGKKELSLEDALSHAAEDSSLQAQDDETGRDIAPEELPEDKL
PETEINVDTEEMSTKESLFKVVQTPVSEIDETATLPAQMDKSHSVQLEGYLGRKHDLEAP
NKRASNRSWNTLYCVLRNSELTFYKDAKSLALGVPYHGEEPFRLKNALCEVAADYKKKKH
VFKLRLGNGSEWLFHGKDEDEMHTWLLGFSTAIIDSQSIKSKAQSLPLPPITTTDVNLTK
KDKEKRFSFFPKKK
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagcaactgattttgatcatttggagattcagccacagtataatcgaatcaat
gctcgatgggaagcctctgatgatgagttggacaatgacaacagttctgccagactcttt
gagagatcccggatcaaagctctagcagatgaacgggaaggtgtgcaaaagaaaactttt
acaaaatgggtgaactctcacctggcacgtgtaacctgtcgcatttcagatctttatatg
gatctcagagatggacgaatgctaattaaattgctggaggtgctttctggagaattactg
cccaagcctactaaaggtcgtatgcgaatccactgtttggagaatgtggacaaagccctg
caattcctcaaggagcagcgtgtgcatttggaaaacatggggtctcatgatatcgttgat
ggcaaccatcgcttggtgctgggcctcatctggacaattattctgcgcttccagatccag
gatatcattgttcagactcaagaaggccgggaaacccgttcagcaaaggatgcattatta
ctttggtgtcaaatgaaaactacaggctatccccatgttaatgtcaccaacttcacctcc
agctggaaggatggtttggcttttaacgctcttattcacaagcacaggcctgacctaatt
gactttgagaaattgaaacactcaaatgccaggcacaatttggaacatgctttcagcgta
gcagagcggcaacttggtatcacacaacttcttgatccagaagatgtttttacggagaac
ccagatgagaaatccattatcacttatgtggttgctttctatcactacttttcgaaaatg
aaggtccttgctgtagaagggaaaagagttggaaaggtaatggaccatgcaatagagact
gagaagatgattgaaaaatacagtggattggcttcagacctgctgatgtggatagaacag
accattaccaatctcaacagccgcaagtttgctaattctctggcaggcgtgcagcagcag
ctccagtacttcagtacatatcgcacagtagaaaaaccacccaaatttcaagagaagggg
aatttagaagttctgctttttaccatccagtccagaatgcgagcaaacaatcagaaagtg
tatacgcctcatgaaggaaaacttgtgtctgacatcaacagggcctgggagaagttggaa
aaggcagagcatgaacgggaactagcactgagaaatgagcttataaggcaggagaagctg
gagcagcttgcccgacgctttgatcgcaaggctgccatgcgagagacctggcttagtgaa
aatcaacgccttgtggcacaggataactttggaaatgacttgccagctgtggaggcagca
aagaagaagcatgaagccattgagacggacacagctgcctataaagaacgggtacagacc
atagaggaggtggccaaggaactggaggtagagaattaccatgacatcaaacgcatcaat
gctcgcaaggacagtatcctgcgactctgggagtacctcttggaactgctgcaagcacgg
cgccagagactggagatgaatctgacactgcagcagctgtttcaggacatgctgcatagc
atcgactggatagaggaaatgaaagtaaaacttttatctcctgaaactgggaagcatctg
ttggaagcagaagacttgcttcagaagcataagttgatggaggctgacatggctattcag
gcggagaagattcatgctgtcaatgcagctgcccttaaatttgccaatggagatggttat
caaccatgtgatcccaaaataatctgtgatcgtgtgaacctcctggaactatactaccaa
gagctgattgctttagctgcaaagaggaaagctcgccttcatcaatccaaacgccagtgg
aagttcttttgggaactggatgaagctgaaagttggatcagggagaaagagcagatctat
tcttccctggactatgggaaagacctcaccagtattctcattttacagaggaaacataaa
gctttcgaggatgagttacgtggcctaggggctcacctgaagcagaccatcaaggaggga
gaaaacatgattgctgagaaacattttggagcatcaaaaatctgcagcaggatagaagaa
gtgaaagctctctggtcccagttgcaggaattggcagctttccgcaagaagaacctacat
gatgcagaaagctttttccagttccaggtagacgcagatgacttgatggcctggctccaa
gatgctaatcggctagtatccagtaatgatgtggggcatgatgaatattccactcaagcc
ttagttaaaaagcacagagatctcttggatgaggtagcaaacaataagaaaattatggac
aacctgtataggcaagcacagagcttccctgctgaattccgggatgttccaggatttgat
aacagactcaaggctatccagacaatgtataatgaggtggtgtctctggcagatctgcgc
aggcagaagctacaggatgctttggatctctatactatattaagtgagactgatgcatgt
gagctttggatgagcgagaaagagaaatggctggagcatatggagattcctgataccttg
gaagatctggatgttgtacaacataggtttgatattttggagcaggaaataaacagcctg
gcttctcagattgaaggggtcaatagagctgctagcaccctaatagaaagtggccatcca
cgcagtgggaaagtgaggcagtgccaagaacatctgaatgccaggtggaaggtcttccag
gaaatggtggctcaaaggcgaaaagctgttgattttgctcttagcctccacaattattgt
gttgattgtgaggaaaccaggaaatggatcttggaaaaaaccaaagtcattgaatctaca
caagaccttggtaaaaatctggcaggcatgattgccatgcagaggaaattgtatggcatt
gaacgtgacctagcagccattcaagccaggcttgctgtcctgcagaaggaggcccatcgc
cttgctgaagagcagcctgatctagctgatgatatctttagtcgactaacagctgtctct
ggagtctggctggacctccaaaatactttacaatcccaggaagcttcccttggagaggcc
agtaagttgcacaagtttttgcaagatttagacgacttccaagcatggctcttcaaggca
caaaaagctgttgcttcagaagaggtgcccaactccttggtagaagctgagcatctcttg
cagcatcatgctgcaattaaggaagagattgatcaacacaaagatgtttacagcaacgtt
aagaagataggagacagagtaactcagggtcagacagatacagagtatcggcagctggag
cagcggctagaaggcatggagacaggctggaatgctttatgtaaaatgtgggacagtcgg
gagaaattcctcaaccagtgtcttggcttccaagaatttcttaaagatgcaaaacaggcg
gaaatcattcttaccaatcaggaatatacactagcccacactgagccaccagacacctta
gaagcatcggaagctgttatacggaaatttgaagatttcctcggtaatatggcagctaat
gaagaaaaagttactggcttgatagacaccgggagcaaacttgctgctgatgggaatatt
tactctgacaaaattattgaaaaagttcagctgattcaaaaaagacacaggacaaatgtc
acaaaatcacaagaggcatttgtattactaaaggacaataatgacttgcaaaatttccta
caaaactgccaagagctcaccatgtggattgaagaaaagatgcttactgctcaagatatg
tcatatgatgaagcgcggaatttgcatagcaaatggctaaagcatcaggcttttatggca
gaacttgcttccaaccaagggtggctagaaaagttggatgaggaaggacaacagttggca
aagcaaaagcccaagtatgcagacattgtgtcccagaagctagaggcacttcatcaacgt
tgggatatgttgcaggcaaccacagaggaaaaggcacagcagctgtttgatgctaaccgc
tctgacctttatgcacagagctatgctgaccttagcgcatggatcagtgagatagaggag
aagctaaactctgatgtccaagggaaagatctcacaagtgttaacattcttctaaagaac
ttgaaacatctggatgagcaagtcagcttgcggaagaaagagatggaaggcttgctttct
cagggccctccagtcaagagagacatggatgaagtggacagcaagcatgagatcattgaa
aggcgatttcaggaccttgcagagccattgggtaggaagaggaaagaactggagatggct
aaggctggatatcaattggaccgggatttggcagatgaattgctttgggtgcaagaacga
ctccctcttgctcagtccactgaccacggcacaaatcttttgtcagtccagctacttaca
aagaaaaaccagaccctgcagaaagaaattattggtcatgccccacgaattgaggaagtt
gttgatagaggggagagcatgttggctaaagctgaaggggatggggacttcagagacacg
gaagaatgcctcaatcagttaaaggtttcctggagcaccttacaggaggaaaccttgaag
aggctgcggcgcctagaggaagccagtgaggctcagcgatactatttagatgctggagaa
gcagaggcctggataagtgaacaggaactttatgtagggacagatgagaagccaaaggat
gaagagagtggcattgtgatgctgaagagacaccttcgccagcagcgatccatagaagaa
tatggaaaaaacatcaaacagctggccagtcgtgctcagaaactgctatctgctggccac
ccagaaggagaagatatcatccgattgcaggggcaagtagataagcagtatgcaggattg
aaagacctggctgaggaacgcagacgtaaagtagaacttgcatatcacctgttcaaactg
aagcgagaagttgatgatctggagcagtggattgcagagagagatgtaatcgcatcatcc
ccagagatgggtcaagacctcgaccatgctactctgctacgggaaaagttccgtgacttc
gctcgagaaacaggaaccctgggacaggagtgggtgaacaatgtcactcaccgaactgat
cagctgattgatatccacccagaagctgccacgattgcagagtggagggatggtttgaac
gagagctgggctgacctgcttgagttgattgacaccagaatgcagttgttgacagcttcc
tatgatctgcacaagttcttttatgatggtagtgagatccaggttcttattgaagagaag
cacaaggagctgcctgaggagttaggccgagatgtcaatacagccgagtccttccacagg
atgcacaaagcctttgagagagatattcacctgttgggagtgcaggttcagcattttcaa
gaggtggcagcacgcctgctggcagcctatgctggagaaaaggccatggccatccagaag
caagaacaggaggtggtaaaagcttggaaggccttgctggaggcttgcgagggtcggcgg
gctcaattagttgatacagctgagaaattccgcttcttctgcatggtgcgagacctcatg
tcctggatggagagtgtgatccggcagattgatacccaggagaagcccagggatgtgtca
tctgtggaattgttgatgaaataccatcaggacataaagtctgagatagccactagggat
aaaagtttcactgcctgcattgaccttgggaaaactttactgcagcgcaagctccatgat
gcagctgagataaaagagaagttgctacaactgacagaaaagaggagggagatgatggaa
aagtgggatagacgttgggactggcttcgcttgttgctggaggtgtgtcagttttccaga
gatgcttcagtggctgaggcctggctcgttgcccaggaaccctacctgtttagtggtgat
tatggtcaaactgtggaaggtgtagagaagctgttgaaaaggcatgaagcgtttgagaaa
tctacagcaacatgggaggaacgttttgctgcattagaacgtctcacaacacttgaacta
ctaaggaagagaaaaatttcagaggagtcttcacagcacaaaatagctaagactacggac
ctggaatttgattttgagttagagccagaatgtgagatcaggcctgttgaaaaggatggg
aagaaggaactaagtttagaagatgccctttcccatgctgcagaagattcatcactgcag
gcgcaagatgatgaaacaggtcgtgatatagcaccagaagagctgcctgaagacaaactg
cctgagacagagatcaatgtggacactgaagaaatgtccacaaaggaatctctttttaaa
gtggtccagacccctgtgagtgaaattgatgagacagcaaccctcccagcacagatggat
aaatctcacagtgtacaacttgaaggttacttggggaggaagcatgacctagaggcacct
aacaagagggcttccaacaggtcctggaatacattatactgcgtgctcaggaatagtgag
ctgaccttctataaggatgccaagagcttggctttaggtgtgccttaccatggagaggag
cctttccggctgaagaatgccctctgtgaagtcgctgcagattacaagaagaagaaacat
gtcttcaagctgagactcggcaatggaagcgaatggctcttccatggcaaagatgaggat
gagatgcacacctggctcctgggattcagcacagcaataattgactcccaaagcattaaa
tccaaggctcagagcctccctctgcctcccatcaccactacagatgtgaacctgaccaag
aaagataaagagaagagattcagcttctttcccaaaaagaagtag
DBGET
integrated database retrieval system
