Thamnophis sirtalis (common garter snake): 106545176
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Entry
106545176 CDS
T06107
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1
KO
K15516
fragile X mental retardation protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106545176 (FXR1)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106545176 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
106545176 (FXR1)
mRNA cycle factors
Stress granule specific factors
106545176 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
FXR_C3
Tudor_FRX1
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
106545176
NCBI-ProteinID:
XP_013917127
UniProt:
A0A6I9XSR7
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MLGPQKGFIKDVHEDSLTVVFENNWQPERQVPFSDVRLPPPPDIKKEIGEGDEVEVYSRA
NDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKPVNKNTFFRCAV
DVPEDLREACANESAHKDFKKAVGACRIFFQAEAAQLIVLSASEATVKRVSILSDMHLRS
IRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVT
AIELEEDTGTFRIYGESAEAVKKARSYLEFVEDFIQVPRSLVGKVIGKNGKVIQEIVDKS
GVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQI
DEQLRQIGMGFRPSSTRGPEKEKGYITDESNPSSVQGSRSYSGRGRGRRGPNYTSGYGTN
SELSNPSETESERKDELSDWSLAGDEDREVLHQRDSRRRPPGGRRSVSGGRGRGGPRGGK
SSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHTTNRRRRSRRRRTDEDASLMDGMT
ESDTASVNENGLVTVADYISRAESQSRQRNLPKETLGKNKKETVKDVIEEVGLSEKAVNG
PAVVSGTESSKQQHSPEEKPSTIQEDGNKQEEAVLNGVS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgttggggccgcaaaagggtttcatcaaagatgttcatgaggattcactcacagttgtg
tttgaaaacaattggcaaccagaacgccaggttcctttcagtgatgtaagattaccacca
ccacctgatatcaagaaagaaattggtgaaggagatgaagtggaggtttactcaagagca
aatgaccaagagccatgtggctggtggctggcaaaggttcgaatgatgaaaggggagttt
tatgtcattgagtatgctgcttgtgatgccacttacaatgaaatagtcacatttgaacga
cttcggcctgtaaatcagaataaacctgtgaacaagaatacattcttcagatgtgccgta
gacgttccagaagacctgagagaggcgtgtgctaatgaaagcgctcacaaggattttaag
aaagctgtaggagcctgcagaatttttttccaggctgaagcagctcaattaatagttctg
tctgccagtgaggcaacagtaaaaagagtgagcatactcagcgacatgcatttgcgtagc
attcgaaccaagttaatgctcatgtcaagaaatgaagaagcaacaaagcatttagaatgc
acaaaacagcttgcagcggcatttcatgaagaatttgttgtcagagaagacttaatggga
cttgcaataggaacacatggcagtaatatacagcaagccaggaaagtgccaggcgttact
gcaattgaacttgaagaagatactggaactttcaggatctatggagagagtgctgaggca
gtgaaaaaagctagaagctatttggaatttgtggaagactttattcaggttcctaggagt
cttgtagggaaagtaattggcaaaaatggcaaagttattcaagagattgtggacaagtct
ggagttgttcgagtgagaattgaaggagacaacgagaacaaactacccagagaagatggg
atggttccatttgtgtttgtgggtactaaagaaagcatagggaatgtccaagtacttctt
gaataccatattgcctacttaaaggaggtagaacaactacggatggaaaggctccagatt
gacgagcagttacgtcaaattggcatgggttttagaccttcatctaccagaggccctgag
aaggaaaagggttatatcactgatgaaagcaacccttcgtctgtacaaggctcacgatcc
tatagtggaagaggcagaggccggagagggcccaattacacctctggatatggaacaaat
tctgagctatctaatccctctgagacagaatcagaaagaaaagacgaactgagtgattgg
tcactagcaggggatgaagatagggaggtcctacaccagcgcgacagccgaaggcgccca
ccaggaggaagacgtagtgtttctgggggtcggggccgaggtggaccgcgaggtgggaag
tcatctatcagttctgtgctgaaagatccagacagcaatccttatagcttactggataac
acagagtctgatcagactgcagatactgatgcaagcgaatcgcatcacaccacgaaccga
cgcaggcgatctcgcagacggaggactgatgaagatgcttccttaatggatggcatgaca
gaatctgacacggcgtcagttaatgaaaatggcttagttacagttgctgattatatatca
agagcagaatctcagagtagacaaagaaacctcccaaaggaaacactgggtaaaaacaag
aaggaaacggtgaaagatgtgatcgaagaggttggcctttctgaaaaagcagtaaatggc
ccggcagtggtttctgggactgaatcttccaagcagcaacatagtcctgaagaaaagcct
agtactatacaagaagacggaaataaacaggaagaagctgtgttgaatggtgtttcataa
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