Thamnophis sirtalis (common garter snake): 106545241
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Entry
106545241 CDS
T06107
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00260
Glycine, serine and threonine metabolism
tsr00630
Glyoxylate and dicarboxylate metabolism
tsr00670
One carbon pool by folate
tsr01100
Metabolic pathways
tsr01200
Carbon metabolism
tsr01230
Biosynthesis of amino acids
tsr01240
Biosynthesis of cofactors
tsr04981
Folate transport and metabolism
Module
tsr_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
106545241 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
106545241 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
106545241 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
106545241 (SHMT2)
Enzymes [BR:
tsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
106545241 (SHMT2)
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Paralog
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Motif
Pfam:
SHMT
Macro
Motif
Other DBs
NCBI-GeneID:
106545241
NCBI-ProteinID:
XP_013917216
UniProt:
A0A6I9XU10
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Position
Unknown
AA seq
502 aa
AA seq
DB search
MLSFPFRHFAKPLQRCCQAKGALRAQHSKAAATSFKEASGWTGQESLAESDPEMWDLVQQ
EKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGSEVVDRIELLCERR
ALEAFDLDPERWGVNVQPYSGSPANFAAYTALLQPHERLMGLDLPDGGHLTHGYMSDVKR
ISATSIFFESMPYKLNPKTGLIDYDQLELTARLFRPRLIIAGTSAYARLIDYARMKKVCE
EVKAYLLADMAHISGLVAAKVIPSPFDYADLVTSTTHKTLRGARSGLIFYRKGVRSVDKK
SGQETLYNLEDKINFAVFPSLQGGPHNHAIAAVAVALKQASSPMFQEYCQQVLKNSKAMA
EALLQRGYNLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPG
GLRLGAPALTSRRFREADFQKVVELMDEGIQIGLDVKQKTSKLQDFKSFLLSDPETKKRL
SDLRQRVETFARAFPMPGFDKR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcttttccttttagacactttgccaagcccctacaaagatgctgccaagcgaag
ggggctctgcgggcccaacacagcaaggcagctgcaacttctttcaaggaggcctcaggc
tggaccgggcaggagagcttggcagagagtgaccctgagatgtgggatttggtacagcag
gaaaaagatcgccagtgccggggtctagaactcattgcctcagagaatttctgtagccgg
gctgccttggaggctctgggctcgtgtctcaacaacaagtattcagagggctatccaggc
aagaggtattatggtggttctgaggtggtggaccgcattgaactgctctgtgaacgccgg
gctcttgaagcctttgacctggatcctgaacgctggggggtgaacgtccagccttattct
ggatccccggccaattttgctgcctacacagccttgttgcagccgcacgaacgtctcatg
ggtctggatttacccgacgggggccacctgactcatgggtacatgtccgatgtcaagcgt
atctcagccacgtccatcttctttgagtccatgccttacaaactcaacccaaaaacagga
ctcattgattatgaccagcttgagttaaccgcccgactgttccgcccacgtctcatcatc
gctggcaccagcgcttatgcccgtcttattgactatgcccgcatgaagaaggtgtgtgaa
gaggtgaaggcctacctgcttgctgacatggctcatatcagtggtctggtggcagctaaa
gtcatcccatcaccctttgactacgctgatttggtgactagcaccactcacaagactctg
cgaggtgcaaggtcagggctgattttctatcgtaagggtgtccgttctgtggacaagaag
agtggccaggagaccctttacaatctggaggacaaaatcaactttgcagtcttcccctct
ttgcaaggtggcccccacaaccatgccattgctgcagtggccgtggcattgaaacaggcc
agctcacccatgttccaagagtattgtcagcaagtactgaagaactccaaggccatggca
gaggcgttgctacaacgaggatacaatcttgtttcaggtggcacagataaccatctagta
ctagtggatctgcgcccaaaaggtattgatggagcccgggctgaaagagtcctggaacta
gtgtccatcactgccaacaagaacacctgtcccggggacaaaagtgctttgacacctgga
ggcttgcgacttggagcacctgcgcttacttcccgacggttccgggaagctgatttccaa
aaggttgtcgagttaatggatgaaggaatccagattggactggatgtcaagcagaagacc
tccaaactgcaagacttcaaatcctttttgctttctgatccagagacaaagaagaggttg
tcagatcttcggcagcgtgttgaaacctttgcccgtgccttccccatgcctggctttgac
aaacgttga
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