Thamnophis sirtalis (common garter snake): 106545270
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Entry
106545270 CDS
T06107
Symbol
NOCT
Name
(RefSeq) nocturnin isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106545270 (NOCT)
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
106545270 (NOCT)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106545270 (NOCT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
106545270
NCBI-ProteinID:
XP_013917250
UniProt:
A0A6I9Y8N8
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MYQNSLRSLCSVLSNLCCTPSSASSSTMLLRSPAPGRRALSPSALLASSSATAGVPRCNC
PAPGSSAAANSQAGYSMGNSTSRLYSALAKTVSSSVITKHQDYLEQTDPEFLDPIDAKDL
LEECQIVLQNRPARLQRDFVDLRTSFIRNHQPIRVMQWNILAQALGEGKDNFIQCPMEAL
RWEERKCLILEEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQCAFLPKPCSPCLDVECN
NGPDGCALFFLKGRFTLISSTNIRLTAMKFKTNQVAIVQILKCNDTGKLFCVAVTHLKAR
NGWETFRSAQGADLLENLKQITQDTDIPLIVCGDFNAEPTEEVYKQFSESSLNLNSAYKL
LSTNGLTEPPYTTWKIRPSGECRHTLDYIWYSQQTLKVDAALSLLTEEQIGPNRLPSFNY
PSDHLSLVCDFTFNESPEKFLRLSEI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaaactctctgaggtctttgtgttccgtcctgtctaacctctgctgcactcct
tcttctgcctcttcctcgacgatgctgctccgctcgccggctccagggaggagagccctc
tcgccttctgccctcctcgcctcgtcctcggctaccgccggagttccgcgttgcaattgc
ccggccccaggcagttcggcagctgccaattcccaggctgggtattccatgggcaacagt
acaagtaggctgtatagtgcactggctaagactgtgagtagcagtgtcattactaagcac
caggactacttggaacaaacagatcctgaatttctggatcctatagatgccaaagatcta
cttgaagaatgccagattgttcttcagaaccgtccagcccggctccaaagggattttgtg
gatttgaggaccagctttatcagaaatcatcagcccattagggttatgcaatggaatata
cttgcacaagctcttggggaaggcaaggacaactttatccaatgccccatggaagccttg
agatgggaagaacggaagtgcctcattctagaagagatccttgcttaccagccagatatc
ctctgtctacaagaagtggatcactattttgatacttttcagccattactcagtcggctg
ggctaccaatgtgcttttcttcctaaaccatgttctccatgtttagatgtggaatgtaac
aatggcccagatggctgtgctttgttcttccttaagggcaggtttacgctaattagtagt
accaacatcaggttgacagcaatgaagttcaaaaccaatcaagttgctatagttcagatc
ctgaaatgtaatgacaccgggaaattgttctgtgttgctgtcacccacttgaaagctcgc
aatggctgggagacgttccgatctgctcaaggtgccgatcttcttgaaaatctaaaacag
atcacccaggacacggacatccctcttatagtctgtggtgatttcaatgctgagcctaca
gaagaagtgtataagcaattctctgaatctagtctgaacctaaacagtgcttacaaactg
ctgagtacaaatgggctaacagagcctccatacaccacatggaagatccgtccttctgga
gaatgcaggcatacacttgattacatctggtattcacaacagaccttaaaagtagatgct
gccctcagccttttaactgaggagcaaattggacccaataggctgccatctttcaattac
ccttcagaccatctatctttagtatgtgatttcacctttaatgaaagtccagagaagttt
ttaagattaagtgaaatataa
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