Thamnophis sirtalis (common garter snake): 106545293
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Entry
106545293 CDS
T06107
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat LGI family member 3-like
KO
K19999
leucine-rich repeat LGI family member 3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106545293
Membrane trafficking [BR:
tsr04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
106545293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRRCT
LRR_5
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
106545293
NCBI-ProteinID:
XP_013917281
UniProt:
A0A6I9XU81
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MCEGRFLQLAEACIDQGQRDDVPCQVLWHCLGVHAESRVAGAGAAGGARGRPGGSARGHR
PPAAEQAQQGEEEEEEEGASAPALQPSHRFCPGATGCVPAAAASGLAGFPPPRLPGWRDG
GLDAAAAAEAQLPSLQFLLLNSNKFSLIRDNTFTGLSHLQYLFIENNDIQSLSKNAFRGL
KSLTHLSLANNNLQTLPRDLLKPLDILSDLDLRGNSLTCDCKIKWLVEWMENTNASIPAI
FCGGPPQYQGQKIRELPLKNFDCITTDFVVHQVLPFQSVSAEPFMYSSDLYVALAQPSSS
SCTILKWDYVERKLRDFDRIPAHSAVYCKPIVVESQLYVVVAQLFGGSYIYRWDTNIDKF
IKIQDIDSQKIRKPNDIEAFQIDGEWFFVIADSSKAGSTSLYRWNQNGFYPHQDLHSWHR
DTDVEYLEVDGKSRLIISSSSQAPIIYQWNRSQKQFAHWGDVAEVLDVQMVKHFQMKRDN
YLCLSRYIGDSKVVRWEGLRFTEVQTVPSQSSMVIGPFQISXSTLYGFGXXLSFTHIYLW
DEDKQKFVKFQELSVQAPRAFQSIPLEAMSVLLAPSFKGNTLVYKHIVVDLSL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaaggccgcttccttcaactcgctgaagcctgcattgatcagggtcagagagat
gatgtcccgtgccaggttctttggcactgccttggagtccacgcagaaagccgtgtcgcg
ggtgcaggagcagctgggggggcaagggggcggccggggggctcggcgagaggccaccgg
cccccagcagccgagcaggcccaacaaggagaggaggaggaggaagaggagggagcctct
gccccagcgctgcagcccagccatcgcttctgcccaggtgccaccggctgcgtccctgca
gcagcagcctccgggctggccggctttcctccgccgcggctgcctggatggagggatgga
ggattggatgctgcggcggcagctgaagcacaacttccgtccctgcagttcctgttgctg
aattccaacaaattttccttgatcagagacaacacgttcaccggcctttctcacctgcaa
tacctgttcatcgagaacaatgacatccagtctctgtcaaaaaatgcctttcgtgggctt
aagtccctgacacatctatctttggccaacaacaacctgcagacgctgcccagagatctc
ctgaagcctttggatatccttagtgatctagaccttcggggcaattctttgacttgtgat
tgcaagatcaaatggctggtggaatggatggagaacaccaacgcaagcatacctgccatt
ttctgtggtggtcctcctcagtaccaaggccagaagatcagagagcttcctctaaagaac
ttcgactgtatcaccacagatttcgtggtgcatcaggtgctgcctttccagtctgtgtct
gctgagccattcatgtactccagtgatctctatgtggctctggctcagccaagttccagc
agctgcaccatcctgaagtgggactacgttgagcgcaaactgcgggattttgaccgcatc
cctgctcactctgctgtttactgcaaaccaatcgtggtagaatcccagctgtacgttgtg
gtggctcagctttttggaggctcttatatttaccgctgggacaccaacattgacaagttc
attaagatccaagatatagacagccagaagatccggaagcccaatgacattgaggctttc
cagattgacggcgaatggttcttcgtcattgccgacagctccaaggcaggctccaccagc
ctctatcgctggaaccagaatggcttctatccccaccaggacctgcactcatggcatcgg
gacacggacgtggagtacctagaggtggatgggaaatcccggctgatcatttccagcagc
tcccaggccccgatcatctaccagtggaatcgctcccagaagcagtttgctcactggggg
gacgtcgcagaagtgctggatgtccagatggtcaagcatttccagatgaagagagacaac
tacttatgcctgagccgttacattggagactccaaggtggtcaggtgggaagggctgcga
ttcacagaggtgcagaccgtgccctctcaaagctccatggtgattggacctttccagata
tcttagtcaactttatatggttttgggtagtgactatcctttacccacatctacctttgg
gatgaagacaagcaaaaatttgtgaagttccaggaactctctgtccaagctccacgggct
ttccagtccatccctttggaggccatgagtgtcctcttagcccccagcttcaaggggaac
acactggtttacaagcatattgtcgtagacctcagcttgtag
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