Thamnophis sirtalis (common garter snake): 106545344
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Entry
106545344 CDS
T06107
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1 isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsr03032
]
106545344 (TOP1)
Enzymes [BR:
tsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
106545344 (TOP1)
DNA replication proteins [BR:
tsr03032
]
Eukaryotic type
DNA Topoisomerases
106545344 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Arg_decarbox_C
Motif
Other DBs
NCBI-GeneID:
106545344
NCBI-ProteinID:
XP_013917333
UniProt:
A0A6I9Y2L6
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSGDQLHNDSQIDPGFRANDSHKHKDKHKDREHRHKEHKKDKDREKSKYSNSEHKEFSEK
KHKEKEKTKHKDGSSEKHDKHKDKHKDREKEKRKEEKSKSSSGEMKIKKEKENGFSSPPC
IKEEIDDDGYYKEDYKRPREDDDIDYKPKKIKTEDVKKSKKRKQEDEEEIKPKKIKSKDK
KPPEGEMKKKKTKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYD
GKVMKLSPKAEEVATFFAKMLDHEYTTKDIFRKNFFKDWRKEMTSEEKGIITSLSKCDFN
HMSQYFKAQTEARKQMTKEEKQRIKEENERLLKEYGYCVMDNHKERIANFKIEPPGLFRG
RGNHPKMGMLKRRIMPEDIIINCSKDSKIPPPPAGHKWKEVRYDNKVTWLVSWTENIQGS
IKYIMLNPSSRIKGEKDWQKYETARRLKKCVDRIRNQYREDWKSKEMKVRQRAVALYFID
KLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPV
EKRVFKNLQLFMENKQPEDDLFDRLNTSILNKHLQDLMEGLTAKVFRTYNASITLQQQLK
ELTTPDDNVPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQTKIDAKKDQLADAKR
ELKSAKADAKIRRDEKSKKTVETKKKAVQRVEEQLMKLEVQATDREENKQIALGTSKLNY
LDPRISVAWCKKFGIPIEKIYNKTQREKFAWAIDMADDDYEF
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggatcagctgcataacgactcccagatcgatccaggtttccgagcgaatgat
tcgcacaaacataaagataaacacaaagaccgagaacatcgacacaaagagcacaagaag
gataaagacagagaaaaatccaagtacagtaatagtgaacacaaagagttttcagagaag
aaacacaaagagaaggagaaaaccaaacataaagatggtagttcagaaaaacatgacaaa
cacaaagacaaacacaaagatagagagaaggagaagcgaaaggaagaaaagagtaaatca
tcatctggtgaaatgaaaataaagaaagaaaaagaaaatgggttctccagcccaccatgt
ataaaagaagaaatagatgatgatggctattataaagaagattacaagagaccacgagag
gatgatgatattgactacaaacctaagaagattaaaactgaagatgtaaaaaaatcaaaa
aaacgaaaacaggaagatgaagaggagattaaaccgaagaaaataaagagcaaagataag
aagcccccagagggagaaatgaaaaagaaaaaaacaaaaaaagaagaggaacaaaaatgg
aaatggtgggaagaagaacgctatcctgaaggtattaaatggaaattcttggagcacaag
ggtcctgtgtttgctcctccatatgaaccgttgcctgaaaatgtcaaattctactatgat
ggtaaagtcatgaaactcagtcccaaagcagaagaggttgcaactttctttgcaaaaatg
cttgatcatgagtacactacaaaggatatcttcaggaaaaacttctttaaagactggaga
aaggaaatgacttcagaagaaaagggaatcatcactagcctcagcaaatgtgactttaat
catatgagtcagtatttcaaggcccaaacagaagctagaaagcaaatgaccaaggaagaa
aagcagagaattaaagaagagaatgaacggttattaaaagaatatggttattgtgtcatg
gataaccataaggaaagaattgccaactttaagattgagcctccaggtctcttcagaggg
cgtggtaaccaccccaaaatgggcatgctgaagcgacgaataatgcctgaagacatcatc
atcaattgtagcaaggattctaaaatccctccacctcctgctggccataaatggaaagag
gttcggtatgataacaaagtaacttggctggtatcatggactgagaatattcaaggatct
attaagtacatcatgttgaatcccagctctagaatcaagggtgagaaagactggcagaaa
tacgagacagctcggagattgaagaagtgcgtagataggattcgaaatcaatatcgagaa
gactggaaatccaaagagatgaaagtgcggcaaagggccgtggcattgtacttcattgat
aaacttgctctgagagctggcaatgagaaagaagaaggggagactgctgacacagtgggc
tgttgctccctccgtgtggaacacattaatttgcatccagaattagatggtcaggaatat
gtagtagaatttgatttccttggaaaagactccataagatactataacaaagtacctgtt
gaaaaaagggtatttaagaatcttcagttattcatggaaaataagcagccagaagatgat
ttatttgataggcttaatactagcattttaaataagcatcttcaagatcttatggaaggg
ctgacagctaaggtattccgaacatataatgcctctattacgctacagcaacaactgaag
gaactcacaaccccggatgataacgtcccagcaaagatcctgtcttacaatcgtgccaac
agagcggttgctattctttgcaaccaccagagggcacctccaaaaacctttgaaaaatcc
atgatgaatttacagaccaagattgatgccaagaaggatcagttggctgatgccaaaaga
gaactaaaaagcgccaaagctgatgccaagatccgaagggatgagaagtctaaaaagact
gtggaaactaagaagaaggctgtacaaagggtggaggaacagctgatgaagctggaagtt
caagcaacagacagagaggaaaacaagcaaatagccttgggtacctccaaactaaattat
ctggatcctagaatttctgttgcttggtgcaagaaatttggaataccgatagagaaaata
tataataaaactcagcgagagaaatttgcctgggcaattgacatggcagatgacgactac
gagttttaa
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