Thamnophis sirtalis (common garter snake): 106545452
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Entry
106545452 CDS
T06107
Symbol
GPKOW
Name
(RefSeq) G patch domain and KOW motifs-containing protein
KO
K13101
G patch domain and KOW motifs-containing protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106545452 (GPKOW)
Spliceosome [BR:
tsr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106545452 (GPKOW)
Complex C
U4/U6.U5 tri-SnRNP related factors
106545452 (GPKOW)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPKOW_C
G-patch_2
KOW
KOW7_SPT5
G-patch
KN17_SH3
KOW5_SPT5
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
106545452
NCBI-ProteinID:
XP_013917484
UniProt:
A0A6I9XNG2
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MAEEKEKPASVPVSFSFSRTIGRKRFLHVTGQTGGEAKQEPDFLSAVEGKELQSVRPAPQ
PKELVIPLIRKNQWKKPEVSATHQEQDGLNGVDAQAVKELIEESKKSQEQWESGSRVDPN
FAIPLLMVNRVPDGFEDGDKVDVSLRPEPSTESDYEEVPVEAYGLAMLKGMGWKAGEGIG
CTFKQDVKPPENRLRPKGLGLGADRSAVKDLKPSGSQRPPKPGEEPSKSKDEPLGLVPGG
AVFIESGPHKELYGKIEGVDGDNARVMVKLAIGSKVVTVSQHGVQPVTQKEYDKLAKDLS
RLSKAHKEKEEEERNGAKDSSDNRASKGKNESRDKKRKHPTDSDRENHTGKQSKSGDSSS
SRAAHWLRQDLRVRFIDKLYKGGKYYNTKMVIEDVLKPDTCVCRIAEGQILDGIHESMLE
TVIPRNDSDWIMVVLGEHVGRMGRILRRDKGQNHAVVQLQQDDEKLLTLDYDAICHYVGG
FEDD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaaaaggagaagcctgcatcggttccggtctcgttcagtttttcccgaacc
atcggacggaagcggttcctccacgtaaccgggcagactggcggcgaagcgaaacaggag
cccgatttcctctccgctgttgaagggaaagaattgcaaagtgttcgaccagctcctcag
ccaaaagagcttgtcattcccttgatccggaagaatcagtggaagaagcctgaggtctct
gcaacccatcaggagcaggatgggcttaatggtgttgatgcacaagcagtcaaagaactc
attgaagaatccaagaaatcacaggagcaatgggaaagtggaagcagggtagatcccaac
ttcgcaattcctctcctcatggtaaaccgtgtgcctgatggctttgaagatggggacaaa
gtggacgtcagcctgcggccagaaccgtcaactgagtcggattatgaagaggtaccagtg
gaagcttatggtcttgctatgctgaagggcatgggctggaaggcaggagaaggcattggg
tgcacatttaaacaggatgtgaagccaccagaaaaccgtcttcgtcccaagggcttgggc
cttggagcagatcgctcagcagttaaggacttgaaaccttcaggatcccagcgacctcca
aagccaggcgaggaaccttcaaagagcaaagatgagcctttggggttggtcccgggaggt
gccgtcttcattgaaagtgggcctcataaggagttgtatggaaagattgaaggtgttgat
ggagataatgcccgtgtcatggtgaaactggcaattggcagcaaagtggtcactgtgagt
caacatggagtacagcctgttacccagaaagaatacgataagctggctaaagacttaagt
cgtctcagcaaggctcataaagagaaggaggaggaagaaagaaatggtgccaaggacagc
tctgataacagggcctccaaaggaaaaaacgagagcagggacaaaaaaaggaagcaccca
acggattcagatagagagaaccatactgggaagcagagtaagtctggtgacagttcctct
tccagagctgctcactggttgcgccaagatctgcgagtccgttttatcgataagctctac
aaagggggaaaatattataataccaagatggtaattgaagatgtcctcaagccagacacc
tgtgtttgccgaatagccgaggggcaaattctggatggtatccatgagtctatgctggag
actgtaattcctcggaatgattcagactggattatggtggtactgggggagcatgttgga
aggatgggccgcattctgcgtcgagacaagggacagaatcatgcagtggtgcaactacaa
caggatgacgaaaagcttctgactctggattatgatgctatctgtcactatgttggtggc
ttcgaggatgattga
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