Thamnophis sirtalis (common garter snake): 106545597
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Entry
106545597 CDS
T06107
Symbol
HMHA1
Name
(RefSeq) minor histocompatibility protein HA-1
KO
K26415
Rho GTPase-activating protein 45
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106545597 (HMHA1)
Membrane trafficking [BR:
tsr04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
106545597 (HMHA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GMIP-like_FCH
RHG29_45_N
RhoGAP
C1_1
FCH
Motif
Other DBs
NCBI-GeneID:
106545597
NCBI-ProteinID:
XP_013917703
UniProt:
A0A6I9Y386
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MLGKRMNSKSAYSPYSAELRKKGSKAGGNVVDSVSFRASVWLKELPRRDGLDVSISSLVD
LSSSTTAATLKRPTSLSRHASAAGFPLSPAIPRGLAKGHKPHSAYSPNELGEGSLAEAED
ITQLLADVACFAERLEKLKDVVLQEDGPESRRSLAHECLGEALRILRQIISKYPLLNTLE
TLTAAGTLISRVKGFHYESNHEAEKREFEKAVEMIAVSFSSTVSEFLMGEVDSSTILSIP
LSDLNQSVENLYGGITNLGPEDVLHDFSSARLSVEEVNVLLQRCDGGVDFALKYSKSISK
YMKDLIYYMEKRTILEIEFSKGLQKIVNTCKQTVTQEPSMPFLSIYSLSLEQDMEYSLNC
LQAATTLRTETYMQPLSLRRLEHEKRRKEIKEQWHRAQRKLQEAENNLRKAKQMYMQRSE
ECDKARHVMAKAEEDQMVSSNSSATLKNLDKKRRLEEEARNKAEEAMATYRTCIADANTQ
KQELEDTKVTALRQLHEVVKQSDQVIKSATISFYQIMHMQTAPLPVYFQTLCESSKLYDP
GQQYASHVKRLQLGDEPETQYDFEPYVSTNNCSPVPRARKGSYSIPEFTGTSSSDTSSKD
GAASEGDTATGRDPQSRPTQLEKRGGRGHQVHKSWPPAITETKDSLESPATSPGEFPQMP
SNGSLSPKEEPDGNSPSFEQSINEMTPGISTPTGPFRHISLSRAAQTHRLRKLRTPSKCR
ECNSYVYFQGAECEECYLACHKKCLETLAIQCGHKKLQGKLQLFGRDFAQASHTGTDGIP
FIVKKCINEIERRAMKTKLPEPIMPFRMYNSLMGLAKETLQSRSDSRAGRSTGEPVDTSS
ESEKAMVTKLKELLKELPGTNLATLKYIMQHLKRIIELEDDNKMSSSNLGIVFGPTLMRP
RPTQATISLSSLVDYPHQACIVEALINFYATVFESSGVSPDSTEETIREDEELVRNQEDE
GTQPHSEVQYLEATSEQTEAALDGDSFREPDTPFIDSDSDPDPDPEDGTEAAIEGIPQAN
SGPGGSETSGEEESPFGEDASEEGVLREIPSVEQSDPEDTSPLHPLGPAEGCWEAEGDAV
FRSGGDEENSDGKVESLLVDLNTNQSNNSLFSHLLIN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcaagcggatgaatagtaagtccgcatacagcccgtattctgctgaactacgg
aagaagggctccaaagccggaggaaacgttgtagactcggtctcctttcgagctagtgtc
tggcttaaggagcttccacggcgagatggcctggatgtatcaatttccagcctggtggat
ttgtcttcatcgaccaccgcagctacactgaagcgtcccacaagtctcagccgccacgcc
agtgcagcaggattccctctctcccctgctattcccagaggtcttgccaaaggtcacaag
ccccacagtgcctatagtcccaatgaactcggcgaagggagcctagcagaagctgaggac
attacacaactgctcgctgacgtggcttgttttgcagagcgcctggagaagctgaaggat
gttgtattgcaggaggatggcccagaatctcgacgatcacttgcccacgagtgtcttgga
gaagccttaagaattcttcggcaaatcattagcaagtacccactgctcaacactttagag
accttgactgcagccgggaccctcatctccagggtcaaaggcttccactatgagtctaac
cacgaagctgaaaaacgtgaatttgagaaagccgtggagatgattgcagtctccttcagt
agcactgtctctgagttcctcatgggagaggtggacagtagtaccatcctttcgatacct
ctttctgatctaaatcagtcggtggaaaatctatatgggggcattacaaatttgggacca
gaagatgtgctgcatgatttcagctcagcacgcctgtcagttgaagaggtgaacgtgctc
cttcagaggtgtgatggaggggtagactttgccctcaaatattccaagagcatctccaag
tacatgaaggatcttatctactatatggagaagaggaccattctggaaatcgaattttcc
aaaggacttcagaagatcgtgaacacctgcaagcaaaccgtcactcaagagccctccatg
ccgttcctctccatctactcgctgtccctggagcaagacatggaatacagtctcaactgc
cttcaagcagccaccactttgcgaaccgaaacatatatgcagcctctgtccctgaggcgc
ctcgagcatgaaaagcggcggaaggagattaaggaacaatggcaccgagcccagaggaag
ctgcaagaggctgagaacaacttgcgtaaggccaagcagatgtacatgcaacgctcggag
gagtgtgacaaggcccggcacgtgatggccaaagcagaagaggatcagatggtgtccagc
aacagctcggccactttgaagaacttggacaagaagagacggctggaagaagaagcccga
aacaaggctgaagaagccatggcaacataccggacctgcatcgcagatgccaacacccag
aagcaggagttggaggacaccaaagtgacagcacttcggcaactccatgaggtggtcaaa
cagagcgaccaggtcataaagtcggctaccatttccttctatcaaatcatgcacatgcag
acagccccactgcctgtctattttcagacgttgtgcgagagcagcaaactctatgatccc
gggcaacagtatgcctctcacgtcaagcggttgcagctgggagacgaacctgagacacag
tatgattttgagccctacgtgtccaccaacaactgttctccggtgcctcgggcaagaaaa
ggcagctacagtattcctgaattcacaggaacgagtagctctgacacctccagtaaagat
ggagcagcctccgagggcgacacagccacaggccgagatcctcagagccgtcccacccag
cttgaaaaacgaggtgggcgaggtcaccaggtacacaaatcatggccaccagccatcaca
gagaccaaggacagtctggaatcccctgccacaagcccaggtgagtttcctcagatgcct
tcaaatggatcgctgtcccctaaagaagaacctgatgggaattcgccttcctttgaacag
agtattaatgaaatgactccaggaatctctacgcccaccggccctttccggcatatcagc
ttgtccagagctgcccaaacccaccggctgaggaagctgcggaccccctcaaaatgccgg
gagtgcaacagttacgtttacttccagggagctgaatgtgaagagtgttacttagcctgc
cacaagaaatgcctggagaccctggccattcagtgcggacacaagaaactccaaggcaaa
ctgcagctctttggacgggactttgctcaggcttcccacaccggcactgatggcatcccc
ttcatcgtcaaaaagtgcatcaatgagatcgaaaggcgggccatgaaaacaaaactccca
gagccaatcatgcccttccggatgtacaacagccttatggggctggccaaggagaccctg
cagagtcgctccgacagcagggcagggagaagcactggggagccagtggacacaagcagc
gagtcggagaaagccatggtaacaaagctgaaggagctgctcaaggagcttccaggcacg
aacttggccaccttgaagtatatcatgcagcacctgaagaggattatagaacttgaagat
gacaataaaatgtcttccagcaacctgggaatcgtctttggccccacgttaatgcggcct
cgacccacccaagctaccatctccctctcttctttggtggattacccccaccaggcatgc
atcgttgaggcactcataaatttctatgctactgtctttgaatccagtggcgtatctcca
gacagcacagaagaaacgatcagggaagatgaggagctggtcaggaaccaggaggatgaa
ggaacacaaccccacagtgaagtccagtatctagaagcaacctctgaacagacagaagct
gctcttgatggagattcattcagagaacccgacactccctttatcgattcggattcggat
ccagatccagatccagaagatggcacagaggcagccattgaaggaatcccacaggccaac
tcagggccaggaggcagtgagaccagcggggaggaggagagccccttcggtgaggacgcc
agtgaggaaggtgtcctgagggagatacccagcgtggaacaatcggaccctgaggatact
tcacccctacatcccctaggcccagcagaaggttgctgggaggccgaaggagatgctgtc
ttcaggagcggaggtgatgaggagaacagcgacgggaaagttgaaagccttctggtggac
ctcaacaccaaccagtctaacaactcacttttctcacacttactgatcaactaa
DBGET
integrated database retrieval system
