Thamnophis sirtalis (common garter snake): 106545640
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Entry
106545640 CDS
T06107
Symbol
AMPH
Name
(RefSeq) amphiphysin
KO
K12562
amphiphysin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106545640 (AMPH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106545640 (AMPH)
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
106545640 (AMPH)
Bin/Amphiphysin/Rvs (BAR) family proteins
N-BAR proteins
106545640 (AMPH)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
106545640 (AMPH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAR
SH3_9
SH3_1
SH3_2
DUF2009
Motif
Other DBs
NCBI-GeneID:
106545640
NCBI-ProteinID:
XP_013917750
UniProt:
A0A6I9Y8Y8
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MVGEKCDVLWEDFHQKLVDGSLLTLDTYLGQFPDIKNRIAKRSRKLVDYDSARHHLEALQ
SSKRKDEGRISKAEEEFQKAQKVFEDFNTDLQEELPSLWSRRVGFYVNTFKNISSLEDKF
HKEIALLCHKLYEVITKLGEQHADKAFTILGAPSDSGPLRIAKTPSPPEEASPPLSPEAN
ANHTLATPSSPAPTRPKSPSQLRKGPPVPPLPKLTPTVDMQQENIISLFDDNFVPEINVT
TPSQNEAPDAKKEESLLDLDFDPFKPDNASTMVTHSPMSQTLPWDLWTSNNEVGQPPLSC
SSCFFLYFLTYLKPDSPKSHSLCNLVMEENPDSGSTEDFSKPQTNLGSLNVSLDADSLKK
TASVGQERTAGGPMPFLQAEESSAESSDMLATPTLPAVGKHEDGTSWTAYANERETTFLR
PCLDISHSGDDGTDLVENNQLLVSETLAEKSSVKTDSFSGGEPFSVEMTKEANPGLEDSF
WTNTDPCEKVDTRGPKLKESFNEIECLKVLEHPNNEAVKKTEVEIRQVLECTNWQRETIT
DSCPQKCDVDFNKANMFKETVGRDFKNMSSSTALEHNRLEMQNALCSLCQDPEETCEGNG
GIKCTQESDMANIIGTVNLQVKDIFSSEFGNLGYDFEAKEAEEICKKYEDCGLNISQESK
DIEYRATCIFLDKDMTVQHGLENPTNAYFSSSKLENMEGELADREMFCVPEEPNISLPQV
LETEPWDDSWNPTFSSDSWGFSSQPISYDSCPFPPTQDSLDGNLDNLWPGFMQDLGELNN
SWGTSCVMMSQQNQEASLQGSTGEESNISTCGSNNISRPLILFQMGNSGKASIENFTSPK
ENETISSDLSEDEIANRRYGLLYQETEADKEEVPTLLYSIASSNAFNGFAQDTSLFSLQL
SQDIPDSKAEEEAPSLGIQAEENSNMAVSDAKSEAQALETDKSTAETVMDSVIEGATETE
CVDATSINEGGEVAITDEIAVTESSIDYIEGKADDTQDNLSSIPSVVIEPASNNEDGDYH
EIQVTESKDSMEEVANQKTEVPTVESSDDISDPTNVIEVQPASSEKQPAATDDMPPGFLY
KVEALHDFEAANSDELTLERGDIVLVIPSAAEADQEAGWLTGIKESNWLQYKDASTYKGL
FPENFTCRFE
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgagaaatgtgatgtgctttgggaagattttcaccaaaagctggtagatggg
tcattactaactttggatacatatttgggacagtttcctgatataaagaatcgcattgca
aagcggagcaggaagctagtagactatgatagtgcaagacatcatctggaagctttgcaa
agttcaaaaagaaaagatgaagggagaatttctaaggcagaagaagagtttcagaaagca
cagaaggtatttgaagattttaacactgatttgcaagaagaactaccatctttatggtca
aggcgcgtgggcttctatgtgaacacatttaaaaatatctccagtcttgaagacaaattt
cataaagaaatagctttgctctgccacaaactttatgaggtgataactaaattgggagag
cagcatgctgacaaagccttcacaatccttggggcacccagcgattctggtccactccga
attgcaaaaactccatcaccacctgaagaggcttccccaccacttagtcctgaagctaat
gcaaatcatacattggcaactccgagttctccagcacctacacgtcctaaatctccttca
cagctgaggaaagggcctcctgtcccaccactgcctaaactcacaccaacagtagacatg
caacaagaaaatatcatcagtttatttgatgataactttgttccagaaataaatgtgaca
accccttctcagaatgaagctcctgatgctaaaaaagaagagtctttgttagatttggac
tttgatcctttcaagcctgataatgcatctactatggtaacccactccccaatgtctcag
acgctaccttgggatctgtggacgagcaataatgaggtggggcagccgcctttatcatgc
tcatcttgtttttttctttactttcttacctatttaaagcctgactctccaaaaagtcat
tccctatgtaacctggtcatggaggaaaatccagacagtgggtcaacagaagattttagc
aagccccaaactaatttaggttcactcaatgtgagcctagatgcagattccctcaagaag
acagccagtgtgggccaggaaagaactgctggtggtcctatgccttttcttcaggcagag
gaaagctcagcagaatcatctgatatgctagctactcctactttgcctgctgtaggcaag
catgaggatggcacatcatggacagcttatgcaaatgaacgtgaaaccacttttctaaga
ccctgcctggacattagtcatagcggagatgatggcactgatctggtggagaacaaccag
cttttagtgagtgaaactttggctgagaagtcttcagtgaaaactgacagtttttctggt
ggagagccatttagtgtggaaatgacaaaagaagcaaatccgggcttagaagactctttc
tggacaaatacagatccatgtgaaaaggtagacaccagaggtcctaagctcaaggagtcc
ttcaatgaaattgaatgtcttaaggtcttagaacatcccaataatgaagctgtaaaaaag
actgaagtagaaattagacaagttttagaatgtacaaattggcaacgagaaacaattact
gatagttgtccccaaaaatgtgatgtagactttaataaagctaatatgtttaaggagaca
gttggaagagatttcaagaacatgagcagctctacagctctagaacataatagacttgaa
atgcagaatgctttatgttccctgtgtcaggatcctgaagaaacatgtgagggtaatggg
ggcataaaatgcacacaggaaagtgatatggcaaatattataggaactgttaatctccaa
gtcaaagacattttttcttcagagtttggaaatcttgggtatgattttgaagcaaaagag
gcagaagagatttgcaaaaaatatgaagactgtggcctcaatatctctcaagagagtaaa
gatattgaatatagagctacttgtatattccttgacaaggatatgactgtgcagcatggg
cttgagaatccaactaatgcctatttcagtagttctaagttagagaatatggaaggtgaa
ctggcagatagggaaatgttttgtgtgcctgaagaacctaacattagtttacctcaagta
ttggagacagaaccttgggatgacagctggaatcctacatttagttctgattcctggggg
ttttctagccagccaattagctatgattcctgtccctttcctcccacacaagactctcta
gatggaaacttggacaacctatggccaggttttatgcaagatttaggagaattaaacaat
agctggggaacttcatgtgtaatgatgagtcagcagaatcaggaagcatctttacaagga
tcaactggggaagagtcaaacattagcacctgtggatcaaacaacataagtaggccattg
attctgttccaaatgggaaactctggaaaggctagcattgaaaacttcactagccccaaa
gaaaatgagaccatcagctcagatttatctgaagatgaaattgctaaccggagatatgga
ttgttatatcaagaaactgaggctgataaagaagaggtacctaccctattatatagcata
gcatcaagcaatgcttttaatggatttgcacaggacacctccctgttttcattgcagcta
agtcaggatattccagatagtaaggctgaagaagaagctccatctttgggaatccaggca
gaggaaaacagcaatatggctgtttctgatgcaaagtcagaagcacaggccttggagact
gataagtcaacagctgaaactgtgatggactcggtaattgaaggtgctactgaaactgag
tgtgttgatgccacttctataaatgaaggtggtgaagttgctattactgatgaaatagca
gttactgaaagcagcatagattacattgaaggaaaagcagacgacacccaggacaacctt
agtagcatcccatcagtagttatagagcctgcctcaaacaatgaagatggagactatcat
gaaatacaagtaactgaatctaaagattctatggaagaagttgctaatcagaaaactgaa
gtacccactgttgaatcttcggatgatataagtgatccaacaaatgtaatagaagtacag
cccgcatcttctgagaagcagcctgcagcaacagatgacatgcctcccggcttcctctat
aaggttgaagctctgcatgattttgaggcggccaacagtgatgaactgacattggaaaga
ggcgatattgtattggtaatcccatcagcagcagaagcagatcaggaagcaggttggtta
acaggcattaaggaaagcaattggcttcaatataaagatgcatccacatacaagggactg
ttccctgaaaacttcacctgtcgtttcgaataa
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