Thamnophis sirtalis (common garter snake): 106545723
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Entry
106545723 CDS
T06107
Symbol
MED13L
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106545723 (MED13L)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
106545723 (MED13L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
106545723
NCBI-ProteinID:
XP_013917839
UniProt:
A0A6I9XPB6
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MDKNFVRIGKWFIRPYEKNEKPINKSEHLSCAFTFFLHGESNVCTSVEIAQHQPIYLISE
EHLHMAQSSPMPFQVLISPYGLSGTLTGQAYKMSDPATRKLIEEWQYFYPMVLKRKESVK
EEEELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVSQNSSAPGSHNSVAQQGAGT
LKDTSSCGMLLTPPTSPEQTVIGDSGGIPTIVNHSAAPDAMVTMQSPKKSGKIPPKFQNC
MVHRVWKECILNRTQSKRNPVPATNMEEEAPANCVSWDFVDPAQRVLCSCSRHKLLKQRC
AVGSSRPPTISQPGFGGGTSSSSTLPPPASKHKTTERQEKSEKVQKRSLLPFHHRPSVTE
DLCMEQDPSGQKLPLTGVEPSLEAASNRKYEKQLSLPARHPSKPANSNPMDSPRSPISPL
PPTLSPQPRGQEADALDPSSDPGNPTLYSNGLELQPLGSAEDRTVLVGQRLPLMAEVSET
ALYCGIVHRRESSNRWQAYSLPLPSDLEFRPPELQCEIHDLRMEVASENSPLKRFLAQPN
KRFKIVEETLPVPAVNSVADLQRMFPTPPSLEQHPAFSPVMSYKDGISSETVTTLGMMES
PVVNMVATQLTEFKMEVEDGLGSPKPEEVKDFSFVHKVSMFQPFMGSSMFAPLKMLPSQC
LLPLKVPEACVYRPSWAIPPKIEQLPLPPAAAFIRDGYNNIPSVGSLADQDYLQMNTPQM
STPVTLNSTAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTD
QGSPASTPSTTRPLNSVEPGTVLPIPEAHSLYVMLLLSDSVLNIFKDSNFDSCCICACNM
NIKGADVGLYIPDSSKEDQYRCTCGFSAIMNRKLGYNSGLFIEDELDIFGRTSDIGQVAE
RRLMMCQNTLIPQLGEGAKRLQEPPVSLLLLLQNQHTQPFTSLSCLDYMSVTSRPALSYT
NWSYDRVQAESHDSWNECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISM
LSSQDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESP
EPLPIPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLDGAKTF
FRDLSAVYEMCRLGQHKPISKVLHDGIMRVGKTVAQKLADELVSDWFNPPWGNEDCDNHS
RLKLYAQVCRHHLAPYLATLQLDSSLLTPPKHQPPSSSNTEQTISGNAGSVSSNSACLGP
TAPSAGTSFSSSANGTTGLPLGTSTAPGSSVPQLLASSSSSSS
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaacttcgtcaggatcgggaagtggttcatccgtccatacgaaaaaaacgag
aagccgattaacaaaagtgagcatttgtcctgcgccttcacattcttcctccacggagaa
agcaacgtgtgtaccagtgtggagatcgcacagcaccagccgatctaccttatcagcgag
gagcacctccacatggcccaatcctctcccatgccttttcaagtgttgatcagtccgtat
ggcttaagtggcactttaactggccaagcttacaagatgtctgacccagccaccaggaag
ctaattgaagaatggcagtatttttatcccatggtgctgaagaggaaggagagcgtgaaa
gaggaagaggagctgggctacgacgatgatttccctgtggccgtagaagtcattgttgga
ggtgtccggatggtgtacccttctgccttcgttcttatctcgcaaaacgacattcccgtg
tcccagaactcttccgcaccaggaagccacaacagtgtggcacaacaaggagctgggact
ttgaaagacaccagcagttgtggaatgttgctcaccccgcccacttctccggagcagact
gtcataggtgacagcggaggtattccaaccatcgtcaatcattcagccgcgccagatgca
atggtcactatgcagagtcccaaaaaatcggggaagatcccacccaaatttcagaactgt
atggtccaccgagtttggaaagaatgcatcctcaacaggacacagtccaaaaggaatcca
gttcccgctaccaatatggaggaagaggcccccgccaactgtgtttcttgggattttgtg
gatccagcccaaagagtcctttgctcttgttccaggcacaaactcctgaagcagcgctgt
gctgtcggctccagtcgtccgcccacgatatcccagccggggttcggagggggcacctcg
tcctcttccaccttgccccctcctgcctctaagcacaaaaccaccgagaggcaagagaag
tcggagaaagtccagaagaggtcgttgctgccatttcaccaccgtccctcggtcaccgaa
gacctgtgcatggagcaggatccttcgggacagaagctgcccttgacgggggtggaacct
tccttagaagctgcaagcaataggaagtacgagaagcagctctccctgcctgcccgacac
cccagcaagccagccaattcgaatcctatggattccccccgctcccccatatctcctctg
cctcccaccctcagcccccagcccagggggcaggaagccgacgctttggacccgtcgtct
gatcctggcaacccaaccctctacagcaatggattggaacttcagccgctgggcagcgcc
gaggatcggacagtcctggtgggccaaaggttgcccctgatggccgaagtcagcgagacg
gctttgtactgcgggatcgtgcaccgccgggagtcgtccaacagatggcaggcgtactct
cttcctctccccagcgatctggaattcaggcctccggagctccagtgtgagatccacgac
ctcaggatggaggtggcgtcggagaacagtcccctgaaaaggttcttagcacagcctaac
aagaggtttaaaatcgtggaggagaccctacctgttccagcagtgaattctgttgcagat
ctgcagcgcatgttccccaccccgccttccttggagcagcacccggctttttcacccgtc
atgagctacaaagatggcatcagctcagagactgtcaccacgctggggatgatggaaagc
ccggtggtcaacatggtggcgactcaactcaccgagtttaaaatggaagtggaagacggt
ttgggcagtccgaagccggaagaagtcaaggatttttccttcgtgcacaaggtatccatg
ttccagccctttatgggttcttctatgtttgccccgctgaagatgctccccagccagtgc
ctgctcccactgaaagtccccgaggcctgcgtctatcggccttcgtgggccattcctccc
aaaatcgagcagcttcctttgccgcctgcagctgctttcatcagagatggttacaacaac
atacccagcgtcggaagcctggctgatcaagattatcttcaaatgaacacgccacaaatg
agcactccggtcacgctcaacagcactgcgcccgccagtaacagtggggcaggggtcttg
ccgtccccggccacccctcgcttctctgtcccgaccccacgcacacccaggactccacgg
actccgagaggcgggggcaccgccagcgggcaagggtccgtcaaatacgacagcacagac
caaggctcgccagcttccacaccctccaccacccggcccctcaattctgtggaaccgggc
accgtcctgcccatcccggaagcccacagcctctacgtcatgctcctcctctccgactcc
gtgctgaacattttcaaggatagcaatttcgacagctgctgcatatgcgcctgcaacatg
aacatcaagggcgccgacgtcgggctgtacatccccgattcgtcgaaagaggaccaatac
cgctgtacttgtgggttcagcgccatcatgaatcgcaagctagggtacaactcgggtctc
ttcattgaggacgagttggatattttcggcaggacttcggacatcggccaggtggccgaa
aggaggctgatgatgtgtcagaacaccttaatccctcagctgggagaaggcgccaaaagg
ctccaggagccccccgtgagtctcctcctcctccttcagaatcagcacacccaacctttc
acctccctgagctgcttggactacatgtcggtcacaagtcggccggcgctgtcttacacg
aactggagttacgacagggttcaggcggagagccacgactcctggaacgagtgctttaac
gccctggagcaaggccgccagtacgtggacaaccccacgggtgggaaggtggatgaagcc
cttgtccgaagtgcgaccgttcactcttggcctcacagcaacgtcctggacatcagcatg
ctttcctcccaagacgtggtgcgcatgcttctctccctccagcctttcctgcaagatgcc
attcagaagaagaggactggcaggacctgggagaacatccagcatgtccaaggacccctc
acctggcagcagttccataaaatggcaggacggggaacctacggttccgaagagtctccg
gagcctcttccgatacccaccttgttggttggctacgacaaggacttcctgacaatctcc
ccattctccctgccgttctgggagaggctgctcctggatccttacggggggcaccgcgat
gtcgcctacattgtggtgtgtccagaaaacgaggccttgcttgacggagccaaaactttc
ttcagggacttaagcgccgtctatgagatgtgtcggcttggtcaacacaaaccaatctct
aaagtgttgcatgatgggatcatgcgtgtggggaagacggtggcccagaagctggcagac
gagcttgtgagcgactggttcaacccaccctggggcaacgaagactgtgacaatcattcc
aggctcaaactttatgcccaagtttgtcgtcaccacctagcaccttacttagctacttta
caactcgatagcagtctgctgacgccaccgaaacaccagcctccatcatcatccaacacg
gaacaaaccatatctgggaacgcaggatccgtttcctccaactcggcctgtcttgggccg
acggctccctcggctggcacatctttcagctcctcagctaatgggaccactggtctcccg
ttgggcaccagtacagccccaggctcttccgtgccccagctcctggcctcctcctcctcc
tcctcttcc
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