Thamnophis sirtalis (common garter snake): 106545771
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Entry
106545771 CDS
T06107
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04010
MAPK signaling pathway
tsr04210
Apoptosis
tsr04218
Cellular senescence
tsr04620
Toll-like receptor signaling pathway
tsr04621
NOD-like receptor signaling pathway
tsr04622
RIG-I-like receptor signaling pathway
tsr04623
Cytosolic DNA-sensing pathway
tsr04625
C-type lectin receptor signaling pathway
tsr04920
Adipocytokine signaling pathway
tsr05132
Salmonella infection
tsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106545771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106545771
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
106545771
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Paralog
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Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
106545771
NCBI-ProteinID:
XP_013917902
UniProt:
A0A6I9XUZ1
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All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MEHYPLGMNQLYNNTSMISTDLPLRTTDGPYLQIIEQPKQRGFRFRYVCEGPSHGGLPGA
SSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKHVHLHAHSLVGKHCEQGVCTVNAGPKDM
ITGFPNLGILHVTKKKVLDTLEARMIDACKKGYNPGLLVHPDLNYIQVEGGGERQLTERE
RDIIRQAANQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLQPVLSDPIYDSKAPNASNLKI
VRMDRTAGCVTGGEEVYLLCDKVQKEKICNYVGPAKVIVQLVTNGKHVHLHAHSLVGKHC
EQGVCTVNAGPKDMITGFPNLGILHVTKKKVLDTLEARMIDACKKGYNPGLLVHPDLNYI
QVEGGGERQLTERERDIIRQAANQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLQPVLSDP
IYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQIRFYEEDESGGVWEGFG
DFSPTDVHRQFAIVFKTPKYRDVNITKAASVFVQLRRKSDLETSEPKPFLYYPEIKDKEE
VLRKRQKLMPNFSDSFGGSGAGSAGGGMYGGVGGGGGGGGSAGSGKSKC
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggaacattaccccttggggatgaatcagctttacaataacactagcatgatttcaact
gatctaccacttcgaacaactgatgggccatatcttcaaataattgaacaacctaaacag
agaggctttcgtttccgctatgtttgtgaaggaccatcccatggtggacttcctggagct
tctagtgaaaagaacaagaagtcttatccacaagttaaaatatgcaattatgttggacct
gcaaaagtaatagtgcagttagtcacaaatggaaaacatgttcacttgcatgctcacagc
ttggtaggaaaacactgtgagcagggagtttgcacagtaaatgcaggaccaaaggacatg
ataacgggatttccaaacctgggaatattacatgttacaaagaaaaaagtattagacaca
ctggaagctcgcatgattgatgcatgtaaaaaagggtacaatccaggactcctcgttcac
cccgatctcaattatatacaagtggaaggcggaggggagaggcagctaacagaacgggaa
cgggatatcattcgtcaggcagcaaatcagcagactaaggagatggacctcagtgtcgta
cggctcatgttcacagcattccttcctgatagcactggtagctttacaaggagacttcag
cctgtcttgtctgaccctatatatgacagcaaagctccaaatgcatccaatttaaaaatt
gttcggatggatcggactgcaggctgtgtaacagggggagaagaagtttacctactttgt
gacaaggtccaaaaggaaaagatatgcaattatgttggacctgcaaaagtaatagtgcag
ttagtcacaaatggaaaacatgttcacttgcatgctcacagcttggtaggaaaacactgt
gagcagggagtttgcacagtaaatgcaggaccaaaggacatgataacgggatttccaaac
ctgggaatattacatgttacaaagaaaaaagtattagacacactggaagctcgcatgatt
gatgcatgtaaaaaagggtacaatccaggactcctcgttcaccccgatctcaattatata
caagtggaaggcggaggggagaggcagctaacagaacgggaacgggatatcattcgtcag
gcagcaaatcagcagactaaggagatggacctcagtgtcgtacggctcatgttcacagca
ttccttcctgatagcactggtagctttacaaggagacttcagcctgtcttgtctgaccct
atatatgacagcaaagctccaaatgcatccaatttaaaaattgttcggatggatcggact
gcaggctgtgtaacagggggagaagaagtttacctactttgtgacaaggtccaaaaggat
gatattcaaatccgtttttatgaagaagatgaaagtggtggtgtctgggaaggttttgga
gacttttcgcctactgatgtgcacagacagtttgcaatagtattcaaaacaccgaagtat
cgagatgtcaacatcacgaaagcagcatctgtttttgttcaattacggcgaaagtcagat
ctagagacaagcgaaccaaagccttttctgtattatcctgaaatcaaagataaagaagaa
gtactaaggaaacgacagaaactcatgccgaacttctccgatagttttggtggaagtggc
gcaggttctgcaggaggtggaatgtatggaggagtaggaggaggtggtggtggtggcggc
agtgctggatcaggtaaatcaaaatgttaa
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