Thamnophis sirtalis (common garter snake): 106545856
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Entry
106545856 CDS
T06107
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106545856 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106545856 (MYO5B)
04131 Membrane trafficking [BR:
tsr04131
]
106545856 (MYO5B)
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106545856 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106545856 (MYO5B)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106545856 (MYO5B)
mRNA cycle factors
P-body specific factors
106545856 (MYO5B)
Membrane trafficking [BR:
tsr04131
]
Others
Actin-binding proteins
Myosins
106545856 (MYO5B)
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106545856 (MYO5B)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106545856 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
WIV_dom_3
Ac76
Motif
Other DBs
NCBI-GeneID:
106545856
NCBI-ProteinID:
XP_013918012
UniProt:
A0A6I9XV83
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MREQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKFPKGTDENWAQKLYDRHGNSQHF
QKPRMSNMAFIIVHFADKVEYYCEGFLEKNRDTVHEEQINILKASKYPVIVELFHDEKDP
APAAPPGKKTSSKINIRSARPTVKAANKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCI
KPNDEKLPFSFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFLNRYRVLMKDKSISK
KNDKTLICKTLLESLIKDPDQFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRG
WMQRRKYRKTREAALSIQRFTRGYLARRLADHLRKTRAAIIFQKQYRMLRIRRAYQAIRQ
AAITIQSFTRGMFVRKNYQKILMEYKAIVLQKYTRAWLARKNFTKFRCAAVMIQCYFRRM
KAKQELKALKIEARSAEHLKRLNIGMENKVVQLQRKIDEQNKEHKSLSEQLSTAASAHYI
EIEKLKKEFERHQQKKGDRNQLVSLQEEIDSLRLALEKAHGERKIVEDTYAKEKQVLQKR
ISDLEEENVLLKEEKEALNNKILGQSEGNFNGAAKTGAPEQKVIETKNEMDLDRDTDLAY
NSLKRQELESENKKLKNDLNELRKAVVDGVVQNNSSNDVHDTYNLLLNQLKSASEELEVR
KEEVLILRTQIIKAAQQKDAGRNMESNLKTQTSWPNSDKHVDPEDAIEAYHGMCQTNRLL
EAQLQEQRREYEEEIETLKDQMETLKEAMEKQHEVFLQTLQLSPEAQVEFGIQQEISRLT
SENLDLKEMLEKLEKNEKKLKKQLRIYMKKVQDYEADQAVTQSEKRKHEISRHVAVQRKE
KDFQGMLEYCEEDESSLIKNLITDLKPQTVSATVPCLPAYILFMCIRHADYINDDQKVHS
LLTSTINGVKKVLKKHNEDFEMTSLWLSNTCRLLHCLKQYSGDTGFMTQNTPKQNEHCLK
NFDLTEYRQVLSDLSIQIYQQLIKIAEDVLQPMIVTAVLENESIQGLSGVKPMGYRKRSS
SRGDSENTYSLEAIIRQLNTFLSIMYDQGLDPEIIQQAIKQLFYMINAVALNNLLLRKDM
CSWSTGMQMRFNISQLEEWLRGKNLHPSGAAKTLEPLIQAAQLLQLKKKTPEDAEAICSL
CT
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgagagagcaaattccctggacactcatcgatttttatgacaatcagccctgcatagac
cttatagaagctaagctgggtatcctggacttgctggatgaagaatgtaagttccctaaa
gggacggacgagaactgggctcagaaactctatgatcgccacgggaacagtcaacatttc
cagaagcctcgcatgtcaaacatggcattcattattgtgcactttgcagataaggtggaa
tattattgcgagggctttttggaaaaaaacagagatacagtccacgaagaacagatcaat
attctgaaggccagcaagtacccagtgattgtggagttgttccatgacgaaaaagaccct
gctccagctgctcctcctggaaagaaaacttcttccaaaatcaatatccgctcggctcgt
ccaactgtaaaagcagccaataaagaacacaagaaaacagtggggcaccagtttcgcaat
tcgttgcacctgttaatggagaccctgaatgctaccactccccattatgttcggtgtatc
aagcccaacgatgagaagctgcctttcagcttcgatccaaagagagcagtacaacaacta
agagcttgtggagtgttggagaccatccgtatcagtgcagcgggctacccatccaggtgg
acctaccatgacttcttgaatcggtatcgggtgcttatgaaagacaaaagtatttcgaaa
aagaacgacaagacattgatttgtaaaacgttattggaaagcctaattaaggatcctgac
cagtttcagtttggacgtacaaagatctttttccgtgctggccaggtggcctacttggaa
aaattgcgggcagataagttccgggctgccaccatcatgatacagaagaccgtgcgcggc
tggatgcagagaagaaaatacaggaaaaccagggaggcagctttaagtatccagaggttc
acccgaggatatttggcacgcagattggcggatcatctaaggaaaacaagagcggccatt
attttccagaaacaatatcgaatgttaaggatacgccgggcctaccaagccatccgtcaa
gcagctatcacgatccagtccttcacccgaggaatgttcgttaggaagaactatcaaaag
atacttatggagtacaaggccatcgtcctccagaaatatactcgagcttggctggctcgg
aagaatttcaccaagttcagatgtgcggctgtgatgatccagtgctatttcaggcgcatg
aaagccaagcaagagctgaaagctctgaagatcgaggcccggtcagccgagcacttgaag
agactcaacattggcatggagaacaaagttgtgcaactacagagaaagatagatgaacag
aacaaagaacacaagtctctcagtgagcagctctccacggcagcctctgctcattacata
gagattgaaaagctgaagaaggaatttgaacgccatcagcagaagaagggagacaggaac
cagcttgtgagcttgcaggaagaaatcgattctctccggttggccctggagaaggctcac
ggggagcggaagattgtcgaagacacgtatgccaaagagaagcaggtgctccaaaagagg
atatccgacttagaagaagaaaatgtccttctgaaggaagaaaaagaggcactgaacaac
aagatattgggccagtcagaagggaattttaatggtgcagctaagactggagcccctgag
cagaaggtaattgaaacgaagaatgaaatggatttggaccgagatacagatctagcatac
aacagtctgaagaggcaagagttagaatctgagaacaagaaactgaaaaatgacctaaac
gaactcaggaaggctgtggtggatggcgtagtccaaaacaattcttccaatgacgttcat
gacacctacaacctcctcctgaatcagctcaagtccgctagcgaagagctggaagtccgg
aaggaagaggtgctcattctcaggacccagattataaaagcagcccaacaaaaagacgca
ggcagaaatatggaatcaaacctcaagacgcagaccagttggcccaatagtgacaagcat
gtggatccagaagatgcaattgaggcctaccatggaatgtgtcaaactaatcggctcctt
gaggctcaactccaggaacagagaagggaatatgaagaagaaatagaaaccctaaaggac
cagatggagaccttgaaggaagcgatggagaaacagcacgaagtcttcctccagacactc
cagttgtccccagaagcccaagtggagtttggcatccagcaggaaatctcacggctgacc
agcgaaaacctggacctgaaagagatgctagagaaactggaaaagaatgagaagaagctg
aagaaacagctcaggatttatatgaagaaagtacaagattatgaggcggatcaagccgtt
acacagtctgaaaagcggaaacacgaaatcagccggcacgtcgccgtccaaaggaaggaa
aaagacttccaggggatgttagaatattgcgaagaggatgaatcttctctcataaaaaat
ctcattacagatctgaagccccaaacagtatctgccacagttccctgcttacctgcctac
atcctttttatgtgcatcagacacgccgattacattaatgatgatcaaaaagtgcactcg
ttactcacctccactattaatggtgttaaaaaagtattaaagaaacataacgaggacttt
gagatgacgtcattgtggctctccaacacctgtcgcctcctacattgtctgaagcaatac
agtggagatacgggttttatgacccaaaataccccaaagcagaatgaacattgcctgaag
aactttgacctcaccgagtaccgtcaggtcctgagtgatctctccatccagatctaccag
caactcatcaaaattgccgaagacgtcttgcagcccatgatagtgactgcggtattggaa
aacgaaagcatccagggcctatcaggagtcaagccgatgggctaccgcaaacgaagctcc
agcagaggggacagtgaaaacacctacagcttggaagcaatcatccggcaactgaacacg
tttttgagcatcatgtacgaccagggcctcgacccagagatcatccaacaggccattaag
cagctcttctacatgatcaatgctgtggccttgaacaacctcctgctgaggaaggacatg
tgttcttggagcaccggaatgcagatgaggtttaacatcagccagctggaggaatggttg
agagggaagaacttgcatccgagtggggctgccaagaccctggaaccattgatccaggca
gcacagctcctgcagctgaaaaagaaaacacctgaagatgctgaagccatctgttccttg
tgcaca
DBGET
integrated database retrieval system
